KEGG   Variovorax paradoxus EPS: Varpa_4884
Entry
Varpa_4884        CDS       T01392                                 
Name
(GenBank) 3-isopropylmalate dehydratase, small subunit
  KO
K01704  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00290  Valine, leucine and isoleucine biosynthesis
vpe00660  C5-Branched dibasic acid metabolism
vpe01100  Metabolic pathways
vpe01110  Biosynthesis of secondary metabolites
vpe01210  2-Oxocarboxylic acid metabolism
vpe01230  Biosynthesis of amino acids
Module
vpe_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00660 C5-Branched dibasic acid metabolism
    Varpa_4884
  09105 Amino acid metabolism
   00290 Valine, leucine and isoleucine biosynthesis
    Varpa_4884
Enzymes [BR:vpe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.33  3-isopropylmalate dehydratase
     Varpa_4884
    4.2.1.35  (R)-2-methylmalate dehydratase
     Varpa_4884
SSDB
Motif
Pfam: Aconitase_C
Other DBs
NCBI-ProteinID: ADU39045
UniProt: E6V122
LinkDB
Position
complement(5302949..5303554)
AA seq 201 aa
MEAFTRLDALAVPLARANIDTDQIVPALYLQKPRSDNFGDYLFHDVRHDVHGRRRDEFVL
NAPVYADARILVAGPNFGCGSSREHAVWALYDGGFRAVIAPSFGDIFFSNALKNGLLPVR
LPQAVVQRMLDDLLAAPGTRMTVDLRTQTVTGPGGRVEPFHIDPFPRQCLLEGLDEIDYT
LAQHAAIDAFEQGRARGAAPL
NT seq 606 nt   +upstreamnt  +downstreamnt
atggaagccttcacacgactcgacgcgctggcggtgccgctggcgcgcgccaacatcgac
accgaccagatcgtgcccgcgctctacctgcagaagccgcggtccgacaacttcggcgac
tatcttttccacgacgtgcggcacgacgtgcacggccgtcgccgcgacgaattcgtgctc
aacgcgccggtgtatgccgatgcgcgcatcctggtggccgggcccaacttcggctgcggc
tcatcgcgcgagcacgcggtctgggcgctgtacgacggcggttttcgcgcggtgatcgcg
ccgagcttcggcgacatcttcttcagcaacgcattgaagaacgggctcttgccggtgcgc
ctgccccaagccgtggtgcagcggatgctcgacgacctgctcgcggcgccgggcacccgc
atgaccgtcgatttgcgcacgcagaccgtcaccggtccgggcggccgcgtcgagcccttc
cacatcgatccgtttccgcgccagtgcctgctcgaagggctggacgagatcgactacacg
ctggcgcagcacgccgccatcgacgcattcgagcaaggccgcgcacgcggcgcggctcct
ctttga

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