Variovorax paradoxus EPS: Varpa_5743
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Entry
Varpa_5743 CDS
T01392
Name
(GenBank) short-chain dehydrogenase/reductase SDR
KO
K00059
3-oxoacyl-[acyl-carrier protein] reductase [EC:
1.1.1.100
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00061
Fatty acid biosynthesis
vpe00780
Biotin metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01212
Fatty acid metabolism
vpe01240
Biosynthesis of cofactors
Module
vpe_M00083
Fatty acid biosynthesis, elongation
vpe_M00572
Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Varpa_5743
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
Varpa_5743
09110 Biosynthesis of other secondary metabolites
00333 Prodigiosin biosynthesis
Varpa_5743
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vpe01004
]
Varpa_5743
Enzymes [BR:
vpe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.100 3-oxoacyl-[acyl-carrier-protein] reductase
Varpa_5743
Lipid biosynthesis proteins [BR:
vpe01004
]
Fatty acid synthase
Component type
Varpa_5743
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
adh_short_C2
adh_short
KR
SDR
Epimerase
Motif
Other DBs
NCBI-ProteinID:
ADU39895
UniProt:
E6UWG5
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All DBs
Position
complement(6250534..6251301)
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AA seq
255 aa
AA seq
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MASTTSSSSSSVLAGKVAFVTGGSRGIGAAIVRRLVRDGAAVAFSYASSAAPADELVRSI
QSEGGRALALKIDSADAAALTAGIDEAARTLGKIDILVNNAGVFLGGALDDFSLEDFDKT
LDVNVRAVFVAAKAASRHMGEGGRIINIGSTNAERMPWPGGAAYAMSKSALKGLVQGLSR
DLGPRGITVNNVQPGPVNTDMNPVDGPNAAAMHGLMALPRHGHPDEIASMVAYLASPEAA
FVTGASLNIDGGFAA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaccacttcttcttcctcttcttctgtcctggccggcaaggttgccttcgtc
accggcggttcgcgcggcatcggcgcggccatcgtgcgccgcctcgtgcgcgacggcgct
gccgtggccttcagttacgcgagctcggccgcaccggccgacgaactggtgcgcagcatc
cagtccgaaggcggccgcgcgctagcgctgaagatcgacagtgccgacgccgcggcgctc
accgccggcatcgacgaagcggctcgcacgctcggcaagatcgacatcctggtgaacaac
gccggcgtgttcctcggcggcgccctggacgacttctcgctcgaagacttcgacaagacg
ctcgacgtcaacgtgcgcgccgtgttcgtcgcagcgaaggcagcctcgcgccacatgggc
gagggcggccgcatcatcaacatcggcagcaccaacgccgagcgcatgccctggcccggc
ggcgcggcctatgccatgagcaagtcggcgttgaagggcctggtgcaagggctttcacgc
gacctcggcccgcgcggcatcaccgtcaacaacgtgcagcccggcccggtcaacaccgac
atgaacccggtcgatggcccgaacgccgccgcgatgcacggcctgatggcgctgccccgc
cacggccaccccgatgaaatcgcgagcatggtggcgtacctcgccagccccgaagcggcg
ttcgtgaccggtgcgagcctgaacatcgacggcggcttcgcagcctga
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