Vibrio parahaemolyticus UCM-V493: VPUCM_1169
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Entry
VPUCM_1169 CDS
T03116
Name
(GenBank) RND efflux system, membrane fusion protein CmeA
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph01501
beta-Lactam resistance
vph01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VPUCM_1169
01503 Cationic antimicrobial peptide (CAMP) resistance
VPUCM_1169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vph03036
]
VPUCM_1169
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vph02000
]
VPUCM_1169
01504 Antimicrobial resistance genes [BR:
vph01504
]
VPUCM_1169
Chromosome and associated proteins [BR:
vph03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VPUCM_1169
Transporters [BR:
vph02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VPUCM_1169
Antimicrobial resistance genes [BR:
vph01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VPUCM_1169
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
BSH_CzcB
Beta-barrel_RND_2
BSH_CusB
YknX_C
HH_EMRA
HH_CzcB
HH_YBHG
HAUS4
RibLong
BSH_LcnD
DUF1344
HH_AAEA_pHBA
Sos7
Motif
Other DBs
NCBI-ProteinID:
AHI99127
LinkDB
All DBs
Position
1:1306822..1307961
Genome browser
AA seq
379 aa
AA seq
DB search
MRRRTTLSLLIASSLFMAGCQPSQEGTEQGGGAAPATEVNVLTVEPVRQALTVELPGRSR
AFKEAEVRPQVTGIISERNFVEGGVVEKGQSLYQIDDSSFQADLLSAEAELIRAQASEES
TFATVKRYRALITKKSISQQDLDEAEAAYKEAKAQVLVAKAKINTAKINLTYTRVKAPIS
GVISKSNVTAGALVTANQADKLTTIQQLDPINVDIVQSSAQLLRLKAALSQGHMQEDQSA
QVALTLEDGSTYEHKGTMKFTEVNVDESTGSVTLRAEFPNPDGLLLPGMFVRATVITGVD
PSAILIPQNTVTRDATGKASVMTVSADNTVAITPVITAEVIDNQWRIIDGLKAGDQVITA
GLQKVRPGSPVTIQTGEQG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtagaaccacgctatcgctgctgattgcatcgagcctgtttatggcgggatgt
caaccaagccaagaaggaactgagcaaggtggtggcgccgctcccgcaaccgaagtgaat
gtgttgacggttgaacctgttcgacaagctttgacggttgagttgccgggccgcagccgt
gcatttaaagaggcggaagtccgcccacaggtaacgggtattatttcagaacgtaacttt
gttgaaggtggcgttgtggaaaaaggtcagtcgttgtatcaaattgatgactcttcattt
caagcggatttgcttagtgcagaagcggagctgattcgtgcgcaagcttctgaagaatcg
acgtttgcaaccgttaaacgttaccgcgcattgattaccaagaaatcgatcagtcaacaa
gatctggatgaagcagaagcggcttacaaagaagcgaaagcgcaagtgctcgtagccaaa
gcgaagatcaatactgcaaagatcaatttgacttatacccgtgtgaaagcgccgatcagt
ggcgtgatcagcaagtcaaatgtgactgcgggagcgttggttacggcaaaccaagccgac
aagctaacgacgattcaacaacttgatccgatcaacgtggatatcgttcagtcttctgct
caattgctgcgactaaaagcggcgctttctcaaggtcacatgcaagaagatcaatctgcg
caagttgcattgacgcttgaagatggctcgacttacgagcacaaaggcacaatgaagttc
acggaagttaacgtggatgaaagtacgggaagcgtgactttgcgagcggaattcccaaat
cctgatggtttacttcttccgggtatgttcgtgcgtgcgaccgtgattactggtgttgac
cctagcgcgattttgatcccgcaaaacaccgtgactcgcgatgcaacaggcaaagcttcg
gtgatgacggtgagtgctgataataccgttgcgattacgccagtcattacggcggaagtt
atagacaaccaatggcgtatcattgatggattaaaagccggtgaccaagttattacggcg
ggtttgcaaaaggtgcgtccgggtagcccagtcaccatccaaacgggagagcagggataa
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