Vibrio parahaemolyticus UCM-V493: VPUCM_1170
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Entry
VPUCM_1170 CDS
T03116
Name
(GenBank) RND efflux system, inner membrane transporter CmeB
KO
K18138
multidrug efflux pump
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph01501
beta-Lactam resistance
vph01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VPUCM_1170
01503 Cationic antimicrobial peptide (CAMP) resistance
VPUCM_1170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vph02000
]
VPUCM_1170
01504 Antimicrobial resistance genes [BR:
vph01504
]
VPUCM_1170
Transporters [BR:
vph02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VPUCM_1170
Antimicrobial resistance genes [BR:
vph01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VPUCM_1170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AHI99128
LinkDB
All DBs
Position
1:1307964..1311125
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AA seq
1053 aa
AA seq
DB search
MARFFIDRPVFAWVLAILTMLAGIMSLFNLPVSQYPTISPTTITISARYPGASAKTVEDS
VTQVIEQNMTGLDYLRYLSSSSDAFGNATITLTFDSEADPDIAQVQVQNKLQLALTSLPM
EVQSQGIVVNKSNTSFLMVVAVYSDDPDFTQNDIADFVVTNIQDPISRVTGVGQVQAFGS
QYAMRVWLDPFKLTQFNLTAIDVANAISEQNAQVSSGQLGAAPAQKGQLLNATISSASRL
SSVAEFQNIILKSDASGANVYLRDVARIERGAESYDIQGQYNGLPASGLGISLGTGANAL
ETAAAVKERLAELSENFPDGLKVAYPFETTPFVEASIQEVVKTLLEAIVLVFLIMYLFLQ
NFRATIIPTIAVPVVLLGTFAILYATGFSVNTLTMFAMVLAIGLLVDDAIVVVENVERVM
HEDGLDPKEATKKSMGQITGALIGVGLTLSAVFVPMAFMSGSTGVIYRQFSITIVAAMTL
SVMVAIILTPALCATLLKKGDAEFTDKKGFFGWFNRKFDSMTAGYEAGVAKLLKRTGRML
LVFVAMSAGAGWLFMNLPTSFLPDEDQGTVFSMAILPPNSTQEQTEKTLDKVRSYFLEEE
KDNVRSVFTVAGFSFAGQGQNMGMAFIGLKDWSEREAPGSDAASLTGRAMGYFSTIKEAM
VFAFAPPAIQELGNATGFDFYLQDSLSLGHEALVAAQGQLLGMAAQNPKLVGVRPNGQSD
APMYQVHVDHVKLRALDVSINDVNQILSAAWGGAYINDYIDRGRVKKVMVQSDAEFRMQP
EDFNSWYVRNAQGEMVPFSAFASGEWTYGSPQLQRFNGLAAMNIQGGAAPGVSTGEAMAE
IEAMVEQLPEGFTVNWNGISYEERLSGNQAPMLYALSILVVFLVLAALYESWSVPLAVVL
VVPLGVLGAVLAVLGRGMDNDVFFQVSLLTTVGLATKNAILIVEFAKEYYEKGAGLIEAT
LHAVRVRLRPIIMTSLAFGLGVVPLAISAGVGSAGQNAVGTGVLGGMISATLLGIFFVPV
FFVVVERLFDRRAQKEAQKERSQELAPATEKSE
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggctcgattttttattgatcgtccggtttttgcttgggtactggcgattctgaccatg
cttgcagggatcatgtccttgttcaacttgccagtgtcgcaatatccaaccatttcgccg
accacgatcaccatcagcgcgcgctatcctggtgcttctgctaaaacggtagaggactct
gtcacgcaggttatcgagcaaaacatgacaggcctggattacctacgttacttgtcttcg
agcagtgacgctttcggtaatgcgaccattacactgacttttgatagcgaagccgatcct
gatatcgcgcaggttcaagtgcagaacaaactgcaattggcgttgacttcgcttcctatg
gaagtgcaaagccaaggtattgtggtgaacaaatctaacacctcatttttgatggtggtg
gcggtttattctgacgatccagattttacacaaaacgacattgccgactttgttgtaacc
aacattcaagacccaatcagccgtgtgacgggtgtgggtcaagtacaggcttttggttct
caatatgcgatgcgtgtgtggcttgacccgtttaagctgactcagttcaacctgacggca
attgacgttgcaaatgcgatcagtgagcagaatgcgcaagtgtcatctggtcaattgggt
gcagcacctgcgcagaaaggtcaactgcttaacgcgacgatttcttctgcgagtcgttta
agcagtgtggctgagttccaaaacatcatcttgaaatcagatgcgagtggtgcaaacgtt
tatctaagagacgttgctcgtattgagcgcggagcagaaagttacgatattcaaggtcag
tacaacggtttgccggcgtctggtttaggtatttcacttggtacaggtgcgaacgcgctg
gaaacggcggctgcagtcaaagagcgtttagcagagttgagtgaaaacttcccagatggt
ctgaaagtcgcttatccatttgagacaacaccgtttgtagaagcatcgattcaagaagta
gtgaaaacgctactggaagcgattgtgttggtgttcttaattatgtacctgttcttacag
aacttccgtgcaacgatcatcccgacgattgcggttccggttgtactcttgggtacgttt
gccattctttacgcgactggcttcagcgtgaataccctgacgatgtttgcgatggttctg
gcgattggtttgctggtggatgacgccatcgttgtggtagaaaacgttgagcgtgtgatg
cacgaagacgggctcgatccaaaagaggctactaagaaatcgatggggcagatcactggc
gcgttgattggtgttggtttgaccttatcggcagtattcgtcccgatggcatttatgtcg
ggttcgaccggggtaatttaccgtcagttctcgatcaccatcgttgcagcgatgacgttg
tcagtgatggtcgcgatcatcctgacacctgcgctgtgtgctacgttactgaaaaaaggt
gacgctgaatttacggataaaaaaggcttcttcggttggtttaaccgtaaatttgattcg
atgaccgcaggttatgaggctggtgtagccaagttgctaaaacgcactgggcgcatgttg
ttggtgtttgtggcaatgagcgctggtgcgggttggttatttatgaatctgccgacgtct
ttcctaccagatgaagaccaaggtacggtgttctcgatggcaatcttgccgccgaactcg
actcaagagcagacagaaaaaacactcgataaagtgcgtagctatttcttggaagaagaa
aaagacaacgtaagatccgtgtttaccgtggctggttttagttttgctggtcaaggccaa
aacatgggtatggcgtttattggcttgaaagattggtctgagcgcgaagcgccgggttcg
gatgctgcatctttgacaggccgtgctatgggttacttctcaaccatcaaagaagccatg
gtatttgcgtttgcacctcctgccatccaagagttgggtaacgcaacgggttttgatttc
tatctacaagactccctgagccttggtcacgaagcattagttgctgcacaagggcaatta
ctgggaatggcagcgcagaatccaaaactagttggtgttcgtccgaatggccaatctgat
gcgccaatgtaccaagtgcatgtagatcacgttaaattgcgcgcgctggatgtcagcatc
aacgacgtgaaccaaatcctatccgccgcttggggtggagcgtatatcaacgactacatt
gaccgtggtcgcgttaaaaaagtgatggtgcaaagtgatgcagagttccgtatgcagcca
gaagattttaactcatggtatgtacgtaatgcgcaaggtgaaatggtgccgttttcggcg
tttgcaagtggtgaatggacgtatggttcaccacagcttcaacgttttaatggcctagcc
gcgatgaacattcaaggtggtgcagctccaggtgtcagtacgggtgaagcaatggctgag
attgaagcgatggttgagcagttaccagagggctttacggtgaactggaacggcatctct
tatgaagagcgtttgtctggcaaccaagctccaatgttgtatgcgttgtccattttggtc
gtgttcctcgtacttgctgcgttgtatgaaagctggtctgtaccgcttgcggtcgtgttg
gttgtacctttgggcgtattaggcgctgtgctcgcagtacttggtcgtggaatggacaac
gacgtgttcttccaagtgagtttgttaaccacagtgggtctggctacgaaaaacgcgatt
ttgatcgttgagttcgcgaaagaatattacgagaaaggtgcaggtctgattgaggctaca
ctgcacgcggtgcgtgtacgtcttcgtccaatcatcatgacgtccttggcgtttggcttg
ggtgtggttccgttggcaatcagtgctggtgtgggctctgctggtcaaaacgcggtaggt
actggtgtgcttggcggcatgatcagtgcgaccttgcttggtattttctttgttccggtg
ttctttgttgtggtagagcgtttgtttgatcgccgtgcccaaaaagaagcgcagaaagag
cgatctcaagaactcgctccagcaacggaaaagtcggagtaa
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