Vibrio parahaemolyticus UCM-V493: VPUCM_20487
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Entry
VPUCM_20487 CDS
T03116
Name
(GenBank) RND efflux system, membrane fusion protein CmeA
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph01501
beta-Lactam resistance
vph01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VPUCM_20487
01503 Cationic antimicrobial peptide (CAMP) resistance
VPUCM_20487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vph03036
]
VPUCM_20487
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vph02000
]
VPUCM_20487
01504 Antimicrobial resistance genes [BR:
vph01504
]
VPUCM_20487
Chromosome and associated proteins [BR:
vph03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VPUCM_20487
Transporters [BR:
vph02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VPUCM_20487
Antimicrobial resistance genes [BR:
vph01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VPUCM_20487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
OEP
AsmA
Peptidase_M23
CusB_dom_1
BMFP
Motif
Other DBs
NCBI-ProteinID:
AHJ01608
LinkDB
All DBs
Position
2:492504..493631
Genome browser
AA seq
375 aa
AA seq
DB search
MQKKPLVALMAATAILAGCGEANNAQRESQAPLVVTQDVTVIDYQPSKSYIGRIEAVEDT
NITAQISGYLQARHFEEGQMVEKGQLLYSIEPSSFEAQVASAKAALAQAKASLKKAELDH
QRGKNLLPRGSISQSEFDALTATLLGARAELEAANAQLKLAEVNLSYTQIRAPFSGRISD
TKVSTGDLVSPSSGVLTTLVSLDPVHTSFSVSERERLAMGMDRIKGDGSAESNGVEVQLE
LENGQFFEHLGQLDFLGNRIDTKTGTIAMRALVPNPEHKLLPGQHIKVNLRDKNTRDVIV
VPRRAVQTDLEGDFVMVTTEGNVAERRNVELGPQVEQGIIIREGLEKGEAVITQGLQRVR
NGVEVRVQTPTEDKQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaaaccacttgtcgcattaatggcggctacagctatccttgcaggatgcgga
gaagcgaataatgcccaaagagagagccaagcgcctcttgtcgtaactcaggatgtcacg
gtaatcgactaccaaccgagtaaatcatatatcggtcgcattgaagcggtagaagatacc
aatatcacagcacagatttcaggctatttacaagctcgtcattttgaagaaggacaaatg
gtagaaaaaggtcagcttctttattctattgaaccttcttcttttgaagcacaagtggca
agtgcgaaagcagcgttagcacaagcaaaagcttcgcttaaaaaggcagagcttgatcac
caacgtggtaaaaacctgcttcctcgtggaagcatctcccaatcggaatttgatgcgttg
acagcaacattgctaggcgcgcgtgcagaactagaagccgcgaatgcacagcttaaactt
gcagaagtcaacctttcgtacacgcaaatccgagcgccgtttagtggtcgtattagcgac
actaaagtgagtactggtgatctggtttctccatcttcaggtgtgctgacgacgctcgtg
agcctagaccctgtgcacacttcgtttagcgtcagtgaacgtgagcgtttagcgatgggc
atggatcgaattaaaggcgatggttcggccgagtcgaacggtgtggaagtgcaactagag
ctagaaaacggccagtttttcgaacacctaggtcagcttgatttcttgggtaaccgtatt
gataccaaaactggcacgattgctatgcgtgcgttggtgccgaacccagaacacaaactg
ctcccgggccagcacatcaaagtcaacttacgtgataagaatacgcgagatgtcatcgtc
gtgcctcgtcgtgcggtgcaaactgacctagaaggtgacttcgtgatggtgacaacggaa
ggcaacgtcgctgagcgtcgcaatgtagaacttggcccgcaagtagagcagggcatcatc
attcgcgaaggtcttgagaaaggtgaagcagttatcacacaaggtctacagcgtgttcgt
aatggcgtagaagtgcgtgttcaaactccaactgaagacaaacagtag
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