Vibrio parahaemolyticus UCM-V493: VPUCM_2590
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Entry
VPUCM_2590 CDS
T03116
Name
(GenBank) C4-type zinc finger protein, DksA/TraR family
KO
K06204
RNA polymerase-binding transcription factor
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vph03000
]
VPUCM_2590
03021 Transcription machinery [BR:
vph03021
]
VPUCM_2590
03009 Ribosome biogenesis [BR:
vph03009
]
VPUCM_2590
Transcription factors [BR:
vph03000
]
Prokaryotic type
Other transcription factors
Others
VPUCM_2590
Transcription machinery [BR:
vph03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
VPUCM_2590
Ribosome biogenesis [BR:
vph03009
]
Prokaryotic type
rRNA transcription factors
VPUCM_2590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
DZR
Not3
Motif
Other DBs
NCBI-ProteinID:
AHJ00549
LinkDB
All DBs
Position
1:2804174..2804620
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AA seq
148 aa
AA seq
DB search
MPEAKKKTIGILAIAGVEPYQEKPGEEYMSPAQVEHFTKILTAWRDQLRAEVDRTVHHMQ
DEAANFPDPVDRASQEEEFSLELRNRDRERRLIKKIEKTLDKIKEDDFGFCESCGVEIGV
RRLEARPTADLCIDCKTLAEIKEKQMQG
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagcaaagaagaaaacgatcggcatcctagccattgccggcgtggagccatat
caggagaagcctggtgaagaatacatgtcaccagcgcaggttgaacactttacgaaaatc
ttaacagcttggcgtgaccaactacgagctgaagtagatcgtaccgttcaccacatgcag
gacgaagcagcaaacttcccagatccagttgaccgcgcctctcaagaggaagagttcagc
ctagaactgcgtaatcgtgaccgtgagcgccgtttgatcaagaagattgaaaaaacatta
gacaaaatcaaagaagatgattttggtttctgtgagtcttgtggcgttgagattggcgtt
cgtcgccttgaagcacgtccaactgcagacctttgtattgactgtaaaacacttgcagaa
atcaaagagaagcagatgcaaggttaa
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