Vibrio paracholerae: SA104470976_01228
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Entry
SA104470976_01228 CDS
T08432
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
vpl
Vibrio paracholerae
Pathway
vpl00220
Arginine biosynthesis
vpl00250
Alanine, aspartate and glutamate metabolism
vpl00430
Taurine and hypotaurine metabolism
vpl00910
Nitrogen metabolism
vpl01100
Metabolic pathways
vpl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
SA104470976_01228 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SA104470976_01228 (gdhB)
00220 Arginine biosynthesis
SA104470976_01228 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
SA104470976_01228 (gdhB)
Enzymes [BR:
vpl01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
SA104470976_01228 (gdhB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
SYZ81345
LinkDB
All DBs
Position
1:complement(1319654..1324495)
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AA seq
1613 aa
AA seq
DB search
MTARETLMPVLLEKVYQLIQDKLELAQQPLVTQLGQHLFSNISQDDLVERNESDLYGAVL
SLWHHINEKKADERSVRVFNPTVSRQGWQSTHTIVEIVLPDSPFLVDSIKMALSRLGLAS
HLMLNGPAHIARHDDGSIKSINQGEGQLTSMFHIEVDRLSSKEEMTELKNELLDILHDTA
LVVKDWKPMATKLEQVINQLEADKKQIPVEAERLQETIQFLRWLGNHNFTFMGYKEFDLV
EKNGDTELTPTKDTGLGLFSDNERVRSVKLSQFPDSARLEAKKPFLLILTKGNKQSRIHR
PAYTDYIGIKKFDAKGKVIGEHRFTGLYTSAVYNQSVEGIPLIREKVGRILAASGYRQGS
YAYKALHNILENYPRDELLQAREEELLEVGMGVVQMQDRDLLRLFVRKDPFGRFFSCMVY
VTKERYNTELRRKTQQVFKQYFGCEQDVEFTTYFSESPLARTHYIVRVDNNNINVDVKKI
EQNLMEASTSWDDRLAEAIVANFGESRGLPLSKEYQRAFPRSYKEDVMPGSALADIEHLE
ALDEHNKLGMLFYRLQETAKDSKAVRLKLYHKDEPIHLSDVMPMLENLGLRVIGESPYEV
VKANGQVYWILDFSMLHKSDKQVDLREARDRFQQAFAAIWAGELESDGFNRLILGASLSG
REVSILRAYARYMRQVGFPFSQHYIEDTLSHHPDLAQGLVDLFVRRFDPKYKGGEKGQAE
IIKSLTEQLDQVQSLDDDRIIRRYMEMINATLRTNYYQLDEHKQNKPWLSLKMKPSEIPE
IPAPVPAFEIFVYAPDIEGVHLRGGKVARGGLRWSDRQEDFRTEILGLVKAQQVKNTVIV
PVGAKGGFVCKKQYLYTTRDEIFAEGQRCYKRFIRALLDVTDNIIEGQVVPPKNVVRHDE
DDPYLVVAADKGTATFSDLANSVSAEYQFWLGDAFASGGSNGYDHKAMGITAKGGWESVK
RHFREMGIDCQTTDFTAIGIGDMAGDVFGNGMLLSKHIRLLSAFNHIHIFIDPTPDSASS
WEERNRLFNLPRSSWEDYNPKLISKGGGVFSRKAKAITLTPEIQKMLNTKKTTLAPNELI
KMILKMEVDLLWNGGIGTYVKSSIETHTDVGDRANDGLRVDGREVHAKIIGEGGNLGMTQ
RGRIEFALKGGRVNTDFVDNVGGVDCSDNEVNIKIFLNGLVANGDLTLKQRNQILESMKD
EVGSIVIDDAYGQSESISVTEAQGVSLMKEQIRFIHHMEKAGYLDRALEHIPDDETLLER
ERQGMGLTRPELSVLMAYGKMALKEELASEEIAQDEFHAKQLVNYFPTKLRGHYAQQMVN
HPLRVEIIATALANQMVNEMGCNFVTRLQEETGSSVVDIANAYAAAREIYGLGTVLEKVR
KLDNIAQSSAQYDVMFLVRRTLRRLTRWLLRNRTGKPSVIAMVERYQEDVKAITEQLDKV
LVKEEIVEHNSMAENWIEKGIEKELAHYVARLSSLYSVLDISAVAKEKGIAVTQTAKLYF
HLGDRLSLHWFLKQINHQAVDNHWQALARASFREDLDWQQRQLTAQVLSSNLSDAQQEIE
QALDKWLERNQVSISRWENILSEFKVGTVHEFAKFSVALRELTLLNLNCLTVE
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgcgtgaaactttgatgccagttttgcttgaaaaagtctatcaactgattcaa
gacaaactagagcttgctcaacaacccttagtgactcaacttggacaacacctgttcagt
aacatttcacaagacgacctagtggagcgtaacgaatcggatctttatggtgcagtgctc
agtttatggcaccacatcaatgagaaaaaagccgatgaacgctcagtacgtgtatttaac
ccaacggtaagtcgccaaggttggcaatcgacccacaccattgttgagattgttctacca
gatagtccctttttggttgattcaatcaaaatggcattaagccgcctaggattggcatcg
cacttaatgctcaacggacctgctcatattgcacgtcacgacgatggctcgatcaaaagc
attaatcaaggagaagggcaactgacctcaatgttccacattgaagtcgatcgcctaagc
agcaaggaagagatgacagagctgaaaaacgaattgctggatatcctgcatgacactgct
ctggttgtgaaagattggaaaccgatggcgaccaagcttgaacaagtgatcaatcagctg
gaagcggataaaaaacagatccctgtagaagccgaacgcctacaagaaaccattcagttt
ttacgctggctaggtaaccataacttcacctttatgggctacaaagagttcgatttggta
gagaaaaatggcgataccgaactgacgccgaccaaagacaccggacttggcttattctct
gacaacgagcgagtacgcagcgtaaaactttctcaattcccagattcagctaggctcgaa
gccaaaaagcctttcctgttgatcttaacgaaaggcaacaagcaatcgcgtatccatcgt
cctgcttataccgactacatcgggatcaaaaagtttgacgcgaaaggcaaggtgatcggt
gagcatcgctttactgggttatacacttccgcagtgtacaaccaaagtgttgaaggcatc
ccactgatccgcgaaaaagtagggcgaattcttgctgccagcggctaccgccaaggctct
tacgcctacaaagccctgcacaatattcttgaaaactacccacgcgatgagctgttacaa
gcccgtgaagaagagctgcttgaagtaggcatgggcgttgtacagatgcaagatcgtgat
ttactccgcctgtttgtacgtaaagacccattcggacgtttcttcagttgcatggtgtat
gtgaccaaagagcgttacaacactgagctgcgccgtaagacacaacaagtgttcaaacag
tattttggctgtgagcaagatgttgaatttacaacctatttctcggaaagcccactggcg
agaactcactacattgtgcgtgtcgacaataacaacatcaacgtagatgtgaaaaagata
gagcagaatttaatggaagcctcaacctcgtgggatgatcgtctcgctgaagccattgtc
gccaatttcggtgaaagtcgtggattaccgctgtcaaaagagtatcaacgtgccttccca
cgttcttacaaagaagatgtgatgccgggctctgcactggcagatatcgagcacctcgaa
gcgttagatgagcacaataaactcggcatgctgttctatcgtttacaggagacagccaaa
gactccaaagcggtacgcttaaagctgtatcacaaagacgaacccatccatctatcagac
gttatgccgatgctagaaaacctcggcttacgcgtgattggtgaatcgccttatgaagta
gtgaaagccaatggccaagtgtactggatccttgatttctctatgctacataagagcgat
aagcaggtggatctgcgtgaagcacgcgaccgattccaacaagcgtttgccgctatctgg
gcaggagagctggagagtgatggctttaaccgtttgattttaggtgcatcactgtcaggt
cgtgaagtttcgatcctgcgtgcttatgcgcgttatatgcgtcaagtcggcttcccattt
agccagcactatattgaagatacactcagccaccatcccgatcttgcacaaggattggtg
gatcttttcgtgcgtcgtttcgatccgaaatacaaaggcggagaaaagggccaagctgag
atcatcaaatctctgacagagcaattagatcaagtacagagtctcgacgacgatcgaatt
atccgtcgctatatggagatgatcaacgcgacgctgcgcaccaactactatcagttggat
gagcacaagcagaacaaaccttggctatctctcaaaatgaagccaagcgagatcccagaa
attcctgcaccagtgcctgcgttcgaaatcttcgtgtatgccccggatattgaaggggtg
catttgcgcggtggtaaagtcgctcgtggtgggctgcgttggtccgatcgccaagaagat
ttccgtactgaaattttaggcttagtcaaagcacaacaagtgaagaatacggtcatcgtg
cctgttggtgcaaaaggtggctttgtttgtaagaaacagtatctctacaccacacgcgat
gagatttttgcagaaggtcaacgctgctacaaacgctttattcgcgctttactcgacgta
acggataacattattgaagggcaagtggttccgccgaagaacgtggttcgtcatgatgaa
gatgacccatatttggtggtggctgcggataaaggcaccgcaaccttctctgatttagca
aactcagtgtcagcagaataccaattctggctcggtgatgcttttgcttcaggggggtca
aacggttatgaccacaaagcgatgggcattaccgccaaagggggttgggaatcggtaaaa
cgtcatttccgtgaaatgggcattgattgtcaaaccaccgattttaccgcgattggcatc
ggtgacatggccggcgacgtgtttggtaacggtatgttgctatcaaaacatattcgctta
ctgtcggcctttaaccatattcatatcttcattgatcccaccccggattctgcgagcagt
tgggaagagcgtaatcgcttgtttaatctgcctcgttcaagttgggaagattacaatccg
aagctgatttctaaaggtggtggcgtcttctcgcgtaaagcaaaagcaattacgctgaca
cctgaaattcagaagatgctcaacactaaaaaaaccacgttggcacccaatgagttgatc
aagatgatcctgaaaatggaagtcgatctcctctggaatggtggtatcggtacctatgtg
aaatcatccattgaaacacataccgatgttggtgaccgagccaatgacggattacgtgtc
gatggacgtgaagtgcacgctaaaatcatcggcgaaggcggtaaccttggtatgactcag
cgcggtcgtatcgagtttgcactcaaaggtggacgcgttaacacggactttgtggataac
gtcggtggtgtagactgttccgataacgaagttaacatcaagatcttcctcaatggcttg
gtggccaatggtgatttaacactcaaacagcgcaaccagatccttgagtcgatgaaagat
gaagtaggaagcatcgtgattgacgatgcttatggacaatctgaatcgatttccgtgacc
gaagcgcagggcgtatcactcatgaaagagcagatccgctttatccatcacatggaaaaa
gcggggtatttggatcgtgctttagagcacattccggatgatgaaactctacttgagcgt
gaaagacagggcatgggattaacgcgtcctgaactttcggtgctgatggcctacggcaaa
atggcgttgaaagaagagctagccagtgaagagattgcgcaagatgaattccatgctaaa
caattggttaactacttcccaactaagttacgcggtcactatgcgcagcagatggtgaac
catccgctacgagtagaaatcatcgcaacagccttagcaaaccaaatggttaatgaaatg
ggctgcaacttcgttacgcgtttacaagaagagaccggctctagcgtggtcgatattgcg
aatgcatatgcggccgcgcgtgagatttacggtttaggtaccgtgctcgaaaaagtacgc
aaactggacaacatagcgcaaagtagcgcccaatatgatgtcatgttcctcgtgcgtcgt
actttgcgtcgcctgactcgctggttactgcgcaaccgtacaggtaagccatccgtgata
gcaatggtcgaacgctatcaagaggatgtcaaagctatcaccgaacaattggataaagtt
ttggtgaaagaggagattgttgaacataattccatggctgaaaactggatagagaagggc
atcgagaaagaacttgcgcattatgtggcgcgtctttctagcctttactctgtactggat
atctcggccgtggcgaaagagaaaggcatcgcagtcactcaaacggcgaagctttatttc
catctcggcgatcgtttatctctgcactggttcttgaagcaaatcaatcaccaagccgtt
gataaccattggcaagcattagcaagagcctctttccgtgaggatctcgattggcagcaa
cgccagttgactgctcaagtgctcagtagcaatttgagtgatgctcaacaggaaattgaa
caggcgcttgataaatggctagagcgtaaccaagtctcaataagccgttgggagaacatc
ctcagcgagtttaaagtcggtaccgttcatgaatttgccaaattctcagtggcattgcga
gagttgaccttgctcaacttaaattgtctcactgtagaataa
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integrated database retrieval system
