Vibrio paracholerae: SA104470976_03406
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Entry
SA104470976_03406 CDS
T08432
Symbol
swrC_2
Name
(GenBank) transporter, AcrB/D/F family protein
KO
K18138
multidrug efflux pump
Organism
vpl
Vibrio paracholerae
Pathway
vpl01501
beta-Lactam resistance
vpl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SA104470976_03406 (swrC_2)
01503 Cationic antimicrobial peptide (CAMP) resistance
SA104470976_03406 (swrC_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpl02000
]
SA104470976_03406 (swrC_2)
01504 Antimicrobial resistance genes [BR:
vpl01504
]
SA104470976_03406 (swrC_2)
Transporters [BR:
vpl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SA104470976_03406 (swrC_2)
Antimicrobial resistance genes [BR:
vpl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SA104470976_03406 (swrC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF6414
Motif
Other DBs
NCBI-ProteinID:
SYZ83419
LinkDB
All DBs
Position
2:complement(754495..757653)
Genome browser
AA seq
1052 aa
AA seq
DB search
MESRLGISGRIAAAFQNSAMTPLLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFPG
ASPREVESLVTTPAEQVISEIEGIDKIYSFSQPDGAMIVAIFKVGVPRNDAVVRIYNKLY
SNKDWMPQGVGVGEPIIKPKGIEDVPIVTITLADKSDRFDQQQLTQVAHGLETELKRIPG
TRDIYTIGGQNTIVDVRLDPAKMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQV
GQFLTRVEEVKQLVVGLHNGKPVYLEDIASVSFGVNTPTQNVWTGDRDGIHPAVTIAIAK
KGGENAVDVARAVEARLVSLENQLIPQGIDVDITRDYGQTAADKSNTLMGKLAFATTAVV
ILVLLTMGWREALVVGMAIIVTLMITLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVV
ENIHRHMAMGKRKLSELIPPAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPIN
ASMGMLISLAVAFVLSPWLAGKFLKAEHHQEEGKAANGIFHKIMSPFVTAPKQGRNRLFL
LLTILALIAGSVLLPVFQAVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFEMGAALN
DVPEVRDYQIYAGTAAPINFNGLVRHYFMRNQAHQGDIQVNLLGRKERDRDSHTIASQLR
PQLNEIALRFGGKVKVVEVPPGPPVWSPILAEVYGPTQEIRNEAARQVREIFRETKDIVD
VDMYLPERHEKWQVVIDRSKAAHLQVPYASIVDALATAVGGKPITYLHSEHSKYPIPIQI
QATETAKVRLEQVLNMKVGSPNGHAYPLSDLVEVRQTRMDDYIVHKNLVPMVMVVGDMSG
ELDSPLYGMFEIGFALDEQMGLAQYYIHQPDGLSGVAVAWDGEWTVTYETFRDMGIAYAV
GMVLIYLLVVAQFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIALAGIIV
RNSILLVDFINQQVEQGMAFSEAVIQSAAVRAKPIMLTALAAMIGAVFILDDPIFNGLAI
SLIFGIFVSTVLTLLVIPVLYYVVMRKRFAAH
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtcgactcggtatttcgggtcgcatcgctgcggcctttcaaaattcagccatg
acaccactgcttgccttagtcggtttgctgatggggttatttgcggtcatggtgacgccg
aaagaagaagaaccgcagattgatgtgacgtttgcggatgtctatattccgtttcccggc
gcttcccctcgtgaagtggaaagtttggtgacaacgccagcagagcaggtgatctctgag
attgaagggatcgataagatctactcattctctcaaccggatggcgcgatgatcgttgcc
attttcaaagtgggtgtgccacgtaatgatgcggtggtgcgcatctacaacaaactctat
tccaataaagattggatgccgcaaggcgttggcgtgggtgagcccattatcaaaccgaaa
ggaattgaagatgtgccgattgtcaccatcaccttggcggataaaagtgatcgcttcgat
cagcagcaactgacgcaagtggcgcacggtttagaaaccgagctcaagcgcattcccggt
acacgcgatatttataccatcggcgggcagaacaccattgtcgatgtgcgactggatccg
gccaaaatgaacggctttggcatcaccttagatcaactcaatcaaagtctgccggcggcg
aatcaaagctcaccgatgctgcgtttaacccatgataaccaagagtttccggtgcaagtt
ggccagtttttaactcgggtggaagaggtcaagcaactggtggttgggttacataacggc
aagcccgtttatctggaagatattgcgagcgtatcctttggggttaacacgcctactcaa
aatgtgtggacgggcgatcgtgacggtattcatccagcggtcaccattgcaattgctaaa
aaaggcggggaaaacgcggtcgatgtcgctagagcggtagaagcgcgtttagtcagtctt
gaaaatcagctgatcccacaagggattgatgtcgatattactcgcgattacgggcaaacc
gccgccgataaaagcaacaccttgatggggaaacttgctttcgcgacgaccgcggtggtg
attttggtgctgctgaccatgggctggcgtgaagcgctggtggtcggtatggctatcatt
gtcaccctgatgattactctattcgcctcttgggcatggggttttacgctcaatcgtgtg
tcgctgttcgcgttgattttctccatcggtatcttggtcgatgatgcgattgtggtggtg
gagaacattcaccggcatatggcgatgggcaaacgcaagttatcggaactcattccccct
gcagtggatgaagtcggcggaccaaccattcttgctaccctaactgttattgcggccttg
ttgccgatggcgtttgtgtcgggtttgatggggccgtacatgagcccaattccaatcaac
gcctcaatgggcatgctgatttctttggccgtggcctttgtgctttccccttggctggcg
ggtaaattccttaaagcggagcatcatcaagaagaaggcaaagcggcgaatggcattttc
cacaaaatcatgtcgccgtttgtcactgcgccaaagcaggggcgtaaccggctgtttttg
ctgctgaccattttggcgctgattgcaggctccgtactgctgccagtgtttcaagccgtg
gtgttgaaaatgctgccgtttgataacaagtcggaatttcagattgtgctggatatgccc
gaaggcagttcgctagaaaaaacgcagcgggtcctgtttgagatgggggcggcactgaat
gacgttcctgaagtgcgggattaccaaatctatgccggaacggccgcgccaattaacttc
aacggtttagtgcgccattattttatgcgtaaccaagcgcaccaaggcgatattcaagtc
aacttactcgggcgtaaagagcgcgacagagatagccacaccatcgccagccaactacgc
ccgcaactgaatgagattgcgctgcgctttggcggcaaagtgaaagtggtggaagtgccg
ccggggccaccagtttggtcgccgattctggcggaagtgtatggtccaactcaagaaatt
cgtaacgaagccgcacgtcaggtgcgtgaaattttccgtgaaacaaaagatattgttgac
gtggatatgtacttgccggaaaggcatgaaaaatggcaggtggtgattgatcgcagcaag
gccgcacatctgcaggtgccttatgcctcaattgtcgatgcgctggcgacggcggtgggc
ggcaaacccatcacttacttgcacagtgaacacagcaagtacccgattccgatccagatt
caagctaccgaaaccgcaaaggtgcgtttagagcaggtgctgaatatgaaagtcggtagc
ccaaacggtcacgcttatccgctttccgatctggttgaggtgcgccaaacccgcatggat
gattacatcgtccacaaaaacttggtgcctatggtgatggtggtcggcgatatgtcaggc
gagctggatagcccactgtacggcatgtttgagattggttttgcgctggatgagcaaatg
ggattggcgcagtactacatccatcaacccgatggcctaagcggtgttgcggtggcatgg
gatggcgaatggacggtgacttacgaaaccttccgcgatatgggtattgcttacgcagtg
ggtatggtgctgatttatctgctggtggttgcgcagtttaaatcttatctggtgccgctg
attattatggctccaatcccactgaccatcattggcgtaatgcccggccatgcgttgttg
ggcgcgcaatttaccgccacctccatgattgggatgatcgcgctggcggggatcattgtg
cgtaactccatcttgttggtggactttattaaccaacaggtcgagcagggcatggccttc
tctgaagccgtgattcagtcggcggcagtgcgagccaaaccgatcatgctgaccgccttg
gcggccatgattggcgcagtgtttatcctcgatgatcctatctttaatggtttggcgatt
agcttgatcttcgggattttcgtctccactgtgctgaccttgttggtgattccggtgctc
tattacgtggtgatgcgtaaacgctttgcggcacattaa
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