Virgibacillus dokdonensis: A21D_00479
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Entry
A21D_00479 CDS
T05261
Symbol
patB_1
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00270
Cysteine and methionine metabolism
vpn00450
Selenocompound metabolism
vpn01100
Metabolic pathways
vpn01110
Biosynthesis of secondary metabolites
vpn01230
Biosynthesis of amino acids
Module
vpn_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
A21D_00479 (patB_1)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
A21D_00479 (patB_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpn01007
]
A21D_00479 (patB_1)
Enzymes [BR:
vpn01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
A21D_00479 (patB_1)
Amino acid related enzymes [BR:
vpn01007
]
Aminotransferase (transaminase)
Class II
A21D_00479 (patB_1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AUJ23592
UniProt:
A0A2K9IUZ7
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Position
complement(492504..493682)
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AA seq
392 aa
AA seq
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MKKQFDRIIKRRGTYCTQWDYTVDRFGEKDILPFSISDMDFQSPFEIRKRLTDWTEHGIF
GYTRWNNDDYKNAILTWYKKRHNTSIHSEWIVYSPSVIYSISQLIALLTDKGDAIVMQTP
AYDAFFKTIALSNRRLLKNSLIYKNGYYVINWIDLEEKLAKSKAKLLLLCNPHNPTGRVW
RKEELIKIVALCNYYGVKIISDDIHMDIIYGKNKYIPIVNVASELDNVFICTSSSKTFNT
PSLGGSYIIIPDHKVRDKYLSLMKNRDGVGSASVFGMIALMEGYNHAAYWVDSLREYLYE
NMEIVYDFIKKEIPSLQFTIPQSTYLAWIDASQLNMSSTVVQEYLVQVGKVGIMSGDVYG
AKGNFLRMNVGCPKEKLYNGLDRLKISVNRLL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaatttgatagaataattaagagaagaggaacctattgtacacaatgggat
tatactgtcgatcggtttggagaaaaggatattttgcctttttctatatctgatatggat
tttcaatctccttttgaaataagaaaacgattaactgactggacagagcatggtattttt
ggatatacaagatggaataatgatgactacaaaaatgcaattctaacatggtataaaaaa
agacataatactagtatccatagtgaatggattgtttacagtcccagtgtgatttattcc
atttcacaacttatagcacttttaacagataaaggggatgcaattgtaatgcagacgccc
gcatatgatgcttttttcaaaacaatagcattatctaacagaagactgttaaagaactct
ctaatatataaaaatggatactatgtgataaattggatagatttagaagagaaacttgca
aaatctaaagcaaaattacttttactttgtaaccctcataatccaactggtagagtttgg
agaaaagaagagttaataaaaatagtagcactatgcaattattatggtgttaaaataatt
tctgacgacatccatatggatattatttatgggaaaaataaatatattccaattgttaat
gttgcttcagaactagataatgtatttatatgtacatctagtagtaaaacatttaatact
ccaagtttaggaggttcctacattatcattccagatcataaagtgagagataagtatttg
tcattaatgaagaatagggatggggtaggaagtgcttcagtttttggtatgattgcttta
atggaaggatataaccatgctgcatattgggttgatagcttacgtgaatatttatacgaa
aatatggaaatagtatatgactttataaaaaaagagattccatcattacaatttaccata
ccacaatctacgtacttagcttggatcgatgctagccaactgaatatgagtagtacggtg
gtccaagaatatttggttcaggtaggaaaggtgggtatcatgtctggtgacgtatatgga
gctaaagggaattttcttaggatgaatgtaggctgtcctaaagagaaattatataatggg
ctagataggttaaagatttcggtgaatcgtttgttatag
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