Virgibacillus dokdonensis: A21D_00907
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Entry
A21D_00907 CDS
T05261
Symbol
yknX_1
Name
(GenBank) Putative efflux system component YknX
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn01501
beta-Lactam resistance
vpn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
A21D_00907 (yknX_1)
01503 Cationic antimicrobial peptide (CAMP) resistance
A21D_00907 (yknX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpn03036
]
A21D_00907 (yknX_1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpn02000
]
A21D_00907 (yknX_1)
01504 Antimicrobial resistance genes [BR:
vpn01504
]
A21D_00907 (yknX_1)
Chromosome and associated proteins [BR:
vpn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
A21D_00907 (yknX_1)
Transporters [BR:
vpn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
A21D_00907 (yknX_1)
Antimicrobial resistance genes [BR:
vpn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
A21D_00907 (yknX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_YhbJ
Biotin_lipoyl
BSH_RND
BSH_CzcB
BSH_CusB
Beta-barrel_YknX
RND-MFP_C
BSH_YknX
Beta-barrel_RND_2
RPOC_hybrid
RnfC_N
Peptidase_M23
Beta-barrel_RND
CzcB_C
DUF4969
Motif
Other DBs
NCBI-ProteinID:
AUJ24019
UniProt:
A0A2K9IW84
LinkDB
All DBs
Position
complement(986566..987420)
Genome browser
AA seq
284 aa
AA seq
DB search
MKKILIVGTVVWMIFLLAACNQEESKEEKKERVVPVETEEVKKGSIEIEKSIYGRTRPSV
SSPVMLQASGKIDELKVSNGDQVEENDVIATIISQAGSQSIRAPKDGKLVQLNANEGEMV
SQEEPLAIVADFHPLTVELSVTASDRKLLEEDDELPIHIEGKEWTATITSVGSVPNDTGL
YPVEAEIDNEDSELLPGMTAQLIVTETTIKDAIVVPTTAVEEQGGESFVYIVKDKQAKRV
DVSVEESQTEETAIEGDVKSGDQVIVKGQLSLKDGSQVKVAKGE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaaattttaattgttggaactgttgtatggatgatttttttattagctgcatgt
aatcaagaagaatcgaaagaggaaaagaaagagcgcgtagtacctgtggaaacagaagaa
gtaaagaaaggttctattgaaattgaaaaaagtatttatggcagaacgcgcccctctgtt
tccagtcccgtgatgttgcaagcctcaggaaaaattgatgagttaaaggttagcaatgga
gatcaggtggaggaaaatgatgttattgccacgatcatatcacaagctggaagccagagt
attcgtgcacctaaagatggcaagcttgttcaactaaacgcaaatgagggagaaatggtg
tctcaagaagaacctctagcgattgttgcagattttcatcctttaacagtggaattgtct
gtaacagcaagtgatcgtaaattattggaagaagatgatgagctacctattcatatagaa
ggaaaagaatggacagcaacgattacttctgttggttccgttccaaatgatacagggctt
tatcctgtagaagccgagatcgataatgaagattccgagctattaccaggcatgaccgct
cagttaatcgtaacggaaacgacaataaaagatgctattgtagttccaaccactgctgtg
gaagaacaaggcggtgaatcgtttgtctatattgtaaaagataagcaagcaaagcgtgtg
gacgtttctgtggaagaatcacaaacagaagaaacggcaattgaaggcgacgtgaaatct
ggcgatcaagttatcgtaaaaggacaactatcgttaaaggatggaagccaggttaaagtt
gcgaaaggggagtaa
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