Virgibacillus dokdonensis: A21D_02854
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Entry
A21D_02854 CDS
T05261
Symbol
patB_2
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00270
Cysteine and methionine metabolism
vpn00450
Selenocompound metabolism
vpn01100
Metabolic pathways
vpn01110
Biosynthesis of secondary metabolites
vpn01230
Biosynthesis of amino acids
Module
vpn_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
A21D_02854 (patB_2)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
A21D_02854 (patB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpn01007
]
A21D_02854 (patB_2)
Enzymes [BR:
vpn01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
A21D_02854 (patB_2)
Amino acid related enzymes [BR:
vpn01007
]
Aminotransferase (transaminase)
Class II
A21D_02854 (patB_2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_3
Motif
Other DBs
NCBI-ProteinID:
AUJ25899
UniProt:
A0A2K9J1U6
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Position
complement(3085146..3086315)
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AA seq
389 aa
AA seq
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MNLFEEQHSRKNTRSVKWDMLKPVFQTDDVLPMWVADMDFRAPEQVNEALIERAKHGIYG
YTMVDDVVKDSVVKWIHRRHNWHIDSNWLSFSPGVVTSLHMAVQALTEPNDKILIQTPVY
TPFYNVIESHDRQIVKNPLRYEDNYYQIDFDDFEAKLKQGVKAFILCSPHNPVGRVWKRE
ELEKMAKLCLDYNVIIISDEIHCDLTFPNERHIPIASLSEDMNDQTVTCMAPSKTFNLAG
LQASYIITPNQERRKKIEAHLSKQGVHGLNIMGNTALEAAYLHGDSWLDELREVLLSHKQ
YVEEMLETHIPEITVTHSEGTYLLWIDCSALNMDPKELREFMIHKAKVGLNTGKDYGEEG
STFMRMNIACPKATLEEGVRRIIQAIQNR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttgaagagcaacatagcagaaaaaatacgcgatctgtaaaatgggatatg
ttaaagcctgtattccaaacagacgatgtcttaccaatgtgggtagcagatatggacttt
agagctcctgaacaggtaaacgaagcacttatcgagcgcgctaaacacggtatttacggc
tatacaatggtggatgatgtagttaaagattcggttgtaaagtggattcatcgtaggcat
aattggcacattgattctaattggttatcatttagtcctggtgttgtcactagtttacat
atggcagtgcaagctttaacagagcctaatgataagatacttattcaaacacccgtatat
acccctttttacaatgtgatcgaaagccacgatcgacaaattgtaaaaaatccattgcgc
tatgaagataactactatcaaattgattttgacgattttgaagctaaattaaagcaaggc
gtaaaggcgttcattctttgctccccacataatccagtaggacgtgtgtggaaaagggaa
gaactagaaaaaatggcgaaattatgcttagattataatgtaattattatttcggatgaa
attcattgtgatttaacgtttcccaatgagcgacatatccctatcgcttctctttctgaa
gacatgaatgaccaaacagtaacatgtatggctccatcgaaaacatttaatttagctggt
ttacaggcttcctatatcattactcctaaccaagaacgaagaaaaaaaattgaagcacac
ttatcaaaacaaggcgtacatggtttaaacataatgggaaacaccgctttagaggcagct
tatttgcatggagacagttggcttgacgaacttcgcgaagttttgctaagtcataaacag
tatgttgaagaaatgttagaaacgcatattccagaaataactgtaacacattcagaggga
acttacttactttggattgactgcagtgctttaaatatggatccaaaagaattacgtgaa
tttatgattcacaaggcaaaagtaggtttaaatacagggaaagattacggagaagaagga
tcaacctttatgcggatgaatatagcttgtccaaaagcaacattggaagagggcgtaaga
agaatcatccaagcaattcaaaacagataa
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