Veillonella parvula: Vpar_1193
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Entry
Vpar_1193 CDS
T01130
Name
(GenBank) Radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
vpr
Veillonella parvula
Pathway
vpr00790
Folate biosynthesis
vpr01100
Metabolic pathways
Module
vpr_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
vpr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Vpar_1193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpr03016
]
Vpar_1193
Enzymes [BR:
vpr01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Vpar_1193
Transfer RNA biogenesis [BR:
vpr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Vpar_1193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_12
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
ACZ24873
LinkDB
All DBs
Position
complement(1364204..1364947)
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AA seq
247 aa
AA seq
DB search
MNVIEIFASIDGEGSRQGLLTTFLRLHDCNIRCSYCDTTYSYGIDSVFTEMTAAEVANVI
ESLGNHRITITGGEPLLQEAAVVELIDELNRRKAETMQDNTSGQAGSTCIIDIDKFDKRE
MLNDSLYDFNIETNGTIIPSFHRDNVWFTYDYKTPSSLAEESMNVDIFKVATERDLIKFV
VGSPEDLDCMRRIIEQYPTVAQIYVSPVWGQIEPASIIDYMKAYNLQNVRFQLQIHKFVW
DPDAKGV
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgattgagatttttgcctctattgatggggaaggtagtcggcaaggcttgttg
actacatttttacgcctccatgattgcaatattcgctgttcctattgcgatacgacttat
agttatggcattgatagtgtctttacagagatgactgcagctgaggtggcgaatgttatt
gaaagcttaggtaatcatcgcattactattactggtggggagcccttattgcaagaagcc
gctgtagtagagctaatcgatgagttaaatcgtcggaaggctgaaacaatgcaggataat
acatcaggtcaagctggttcaacttgtattattgatatagataaatttgataaacgagag
atgcttaatgatagcctttatgatttcaatattgaaacaaatggcacgattataccgagc
tttcacagagataatgtgtggtttacctatgattataaaacaccgtcctctttagccgaa
gagtctatgaatgtagatatattcaaggtggctacagaacgagatctcataaagtttgtc
gttggctccccagaagatttggattgtatgcgtcgcataattgaacaatatcctacagtg
gctcaaatatatgtatcgcctgtatggggacagattgagccggcatcgattatcgattat
atgaaagcatataatttacagaatgtacgatttcaactgcaaatccataaatttgtctgg
gatccagatgcaaagggtgtatag
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