Vespula pensylvanica (western yellowjacket): 122633856
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Entry
122633856 CDS
T07720
Name
(RefSeq) cadherin-99C isoform X1
KO
K16500
protocadherin-15
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vps03037
]
122633856
04515 Cell adhesion molecules [BR:
vps04515
]
122633856
Cilium and associated proteins [BR:
vps03037
]
Primary cilia and associated proteins
USH complex and associated proteins
122633856
Cell adhesion molecules [BR:
vps04515
]
Cadherins
Protocadherins
122633856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
PCDH15_12th
P22_gp7
Motif
Other DBs
NCBI-GeneID:
122633856
NCBI-ProteinID:
XP_043678210
LinkDB
All DBs
Position
13:complement(692929..746744)
Genome browser
AA seq
1636 aa
AA seq
DB search
MKRSRRMSARVSPREEERNGRRTERRPQATRPSPLYRRPRRSTRTRLDLRLVSCKLAPPG
WFWCLLCVFLRFHGVASKAGLCEVESGQSNIILDIEESRGNAIDQKTTPEEVPVSGDPYN
ETTLELIFPGRQPLFKLIGKKLQLLEPLDRDDENLSHVVFQLSCTVKLTNKKRTIPVIVR
VSDINDNAPKFINTPYETTVPELTPVGSTIFKNVVAIDADAGVNGIVEYSIAPGDGTGIG
NNDGVGRNRITTADGYGYFSINLPHQGQVTVNRTLDFERTQRYLVTILASDRALNVSERF
TSTTTLTVNIRDDDDQDPSFIYQGCMLLDGACINPEYSASVSSGVLSGILNISPEKIQAV
DMDSINAPIHYSFLSGNPSNYRDFFEINPNSGAVKQIKAVDTSVTKKFDIIIKAVEVSEA
KRSATAKLIITVKPVDSNPPVITASNNEGFVDENAPVGTKVIDKNGKPITLTVSDADLGV
DDPKPAYTFELTTSYFSIDPSGVLIVNEENLDRDPPNPGRFRFQVVAREKTGLAASAPLS
FVVTLNDVNDNAPHLPMTAPISVQAGETRRQVTKVEATDNDEGENAEITYSIYHVSNNGL
HKFKIDPKSGVIESVRKLNAGEQYSITVQATDKGGKYSQTIVEVNVIPGPNTRSPVFQQP
VYEVQVSEGASINSTVATITAVDPENDPVSYSIVSGNDLRQFAIGDKSGVITVIRKLDRE
DLTRYQLLIKAEDTGGLSSTATVNIKVTDINDKNPEFVELPYQFSVKEGEARKLIGRVHA
EDADEGINAEITYFAPDDIPFTVDPETGDVLTKIVLDYEQNDEYKFVVTARDGAPDYRLA
TATVTVKVIDVEDEVPIFRQSSYEARVKENVPDYMVIQVMADDPDTKKQITYTIKQGDTE
LFAIDPKNGVIKTIRGLDYERENQHILIVGTVENTSDLPGSTTRVVVNVQDVNDIPPIFT
MVPRPITLDDDSPIGTTVINLVAADSDGTAPGNQVRYEIIGRGIASKYFVIDPDTGVIRI
RDDLRKETDSEYQVDVRAYDMGEPRLSSVTTVPIFVRHVATVPPEVGLGFAENSYNVEVP
EDAADGTLIKIITIINSHAHDSTPLKCEIYSGNENDLFEANVTEERNCALKLKKAALDYE
TTEFYQIKIRLESLSGLLNSGRNTTMVKIQVIDVNDNKPEFIFPEDDYKLRRGRYFAAIP
RNAQFGSSVIQVKAHDKDNGKYGKLEYKILEGRGSDYFAMDAFSGIIRTTATFDNVDPSE
LPFKFDVNVRDNPNSTTNFNSIVAPVIVNLIGEENLLILVIQDAAPEVLQKDARRMANII
EEKSGLLVGIDRIAVRKVRTKNGTVETYPQDSDVWFYAIDPDTELILDRNSSRIQRSIVE
RTAVSNITFDVSTLVRANAIDIHAPVMYAEPVRTQTAVAFSGEVFPYALIIIACVILILG
IAGIIYISVSWSRYKAYKERMQRMYVVPRYDPVYVEPNLKEYETQVLQMSVPVDDNDSYN
DLQLDFSNKNHAFSLDNVSYITKDHGGSTGQQSPVSSEAATTARASSIAGNHAEGNVHSL
RRSTLGRKNHTTSNSNTMNNHDTTTPVLNPLYNHGGDLLSASPSNDNVTFREKKDYSHLG
FTYLYEQSPVETTTEL
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggagtcggagaatgagcgcgcgcgtgtctccgagagaagaagagaggaatgga
aggaggacggaaaggaggccacaggcgacccgaccgtcaccgttatatcggcgcccacgg
cgaagtactcgaactcggctcgatttacgactagtttcctgcaagttggcaccacccggt
tggttctggtgtttgctctgcgtctttcttcgtttccatggtgtcgcatcgaaagccgga
ttgtgcgaggtggagtccggccaatccaacattattctggacatcgaggagagcagggga
aacgctatagatcagaagacaacgccggaagaggtgccagtatctggcgatccctacaac
gagacaacgttggagttgatttttcctggcagacaaccgctctttaaattgatcggcaag
aaacttcagcttttagagcctctggatagagacgacgagaatctatcgcacgtcgtcttt
cagttgagctgcaccgtcaagctaaccaacaagaagcgcacgataccagttatcgtcagg
gtttcagatatcaacgataacgcacctaaattcatcaatacgccttatgagactaccgta
cccgagctgacgccagtcggttcgacgatctttaagaacgtcgtggcgatcgacgccgat
gctggagtgaacggtatagtcgaatactcgattgcaccaggagacggaacaggaattggt
aacaacgatggggtcggtcgcaataggatcacaaccgcggacggttatggatactttagt
atcaatttgcctcatcagggtcaggtcaccgtcaatcgtactcttgacttcgagagaacg
caacgttacttggtcactattctggcttctgatagggcgttgaacgtatcggagagattc
acatccacgaccaccttgactgtgaacatcagagacgacgacgatcaagatccatccttc
atctaccaaggttgtatgctgctggatggcgcctgcattaatccggaatactcggcatcc
gtatcgagtggagtattgtcgggtatattgaacatatcaccggagaaaatacaggcagtt
gatatggacagcataaacgcacctattcactattcatttctcagtggaaatccatcgaac
tacagagatttcttcgagatcaatccgaattcaggtgcggtcaagcagatcaaggctgtc
gacacgtcggtcactaaaaagttcgacataataataaaggcggtagaggtgtcggaagca
aaacgatctgccacggcgaagctgataatcacggtgaaaccggtcgacagcaatccaccg
gtgatcacggcttcgaacaacgagggttttgtcgacgagaatgcgccggtcggtacaaag
gtcatcgataaaaatggcaagccaataacgcttaccgtatccgatgccgatctgggtgtc
gacgatccaaaaccggcctacacgttcgagctgacgacgagctacttttcgatcgatccg
tctggcgtcctgatcgttaacgaggaaaatctcgatcgggatccaccgaatcctggccgt
tttcggtttcaggtcgtcgccagagagaaaacgggcttggccgcgtcggcgccgctttct
tttgtcgtgacgttgaacgacgttaacgataacgcgcctcatcttccaatgacagcaccg
atttcggtccaggccggagagacgagacgtcaagtgacaaaggtagaggcgactgacaac
gacgagggcgagaacgctgagataacgtacagtatttatcacgtgtcgaacaacggactg
cacaagttcaaaatagatcctaaaagcggcgttatcgaatccgtgaggaagcttaacgcg
ggagaacagtacagcatcactgttcaggccaccgacaaaggtggcaaatattctcaaaca
atcgtagaggtaaatgttattcctggaccgaatacgaggagtccggtctttcaacagccc
gtctacgaggtacaagtcagcgagggtgcttcgatcaattctacggtcgccacgataacc
gccgttgatccggaaaacgatcccgtgtcatattccattgtttcgggaaatgatttgaga
cagtttgcgatcggtgataaatccggcgtcatcaccgtcataagaaaattggatagagaa
gatctgacccgttatcaattgttgataaaagccgaggacaccggtggcctttcgagtacg
gctacggtcaatatcaaagtcaccgacatcaatgacaaaaatccagaattcgtcgagctg
ccctatcaattctctgtgaaggagggcgaggcacgtaagttgataggtcgcgtacatgcc
gaggatgccgacgagggtatcaacgcggaaatcacttatttcgccccggacgatattcca
ttcacggtcgatcccgagaccggcgacgtcctgacgaagatcgttttagattacgagcag
aatgacgaatacaaattcgtggtaaccgcgagagacggagcgccggattatcgtttggca
actgcgaccgttaccgtcaaagtgatagacgtagaggacgaagttccaatctttcgtcag
agtagttacgaggcacgagttaaggagaacgtcccggattacatggtgatacaagtgatg
gccgatgatccggacacaaagaagcaaatcacatatacgatcaagcaaggagacaccgaa
ctctttgccatagacccgaagaatggagtgataaaaaccattcgtggtctcgactatgag
agagagaaccaacacattcttatcgtcgggacggtcgagaacacgagcgatctccccggt
tctaccacgagggtcgtcgtcaatgtccaggacgttaacgatataccaccgatctttacc
atggtgcctcgacccattacgctggatgacgactcacctataggaacgacggttatcaat
cttgtcgccgcagattccgacggcacggcacccggaaatcaggtgcgatacgagattatc
ggtcgtggtatagccagcaaatactttgtcatcgatcctgatacaggagtgatcaggata
cgggatgatctacggaaagaaacggactctgaatatcaggtggacgttagagcgtacgac
atgggcgagcctcgattgtcgtccgtgacgaccgtcccgatttttgttcgacacgtcgcc
actgtgccgccagaggtcggcttgggctttgcagagaattcctacaacgtcgaggtgccg
gaagatgctgccgacgggacgttgataaagataattacgatcatcaacagtcacgctcat
gattctacgcccttgaaatgcgagatttacagcggaaacgagaacgatttgttcgaggcg
aatgtcaccgaggaaaggaattgcgctcttaaattgaaaaaggctgctctcgactacgag
accacagaattttatcagatcaagatcaggctggagtcgttgtccggtttattgaattct
ggtcgcaacacaaccatggtaaagattcaagtcatagacgtgaacgacaacaagccggaa
ttcatctttcccgaggacgattacaaacttaggagaggtcgttacttcgccgcgatacct
cgaaatgcgcagttcggctcgagtgttatacaagtaaaggcccacgacaaggacaacggg
aaatacggaaaattggagtacaagattctcgagggacgtggttccgattatttcgcgatg
gatgctttctctggaataatacgaacaaccgcgacctttgacaacgtcgatccttccgag
ttaccgtttaaattcgacgtgaacgtacgtgacaatccaaactcgacgacgaacttcaac
tcgatcgttgctccggtgatagtgaatttaataggcgaagaaaatttattgatcctggtg
attcaggacgcggcacccgaggtacttcagaaggatgctaggagaatggcgaatatcatc
gaggagaagagcggactgttggtcggtatcgataggatcgccgttaggaaggttcgcacg
aagaatgggacggtcgagacttatccccaggactcggacgtttggttttacgcgattgat
cccgataccgagctgatattggatcgcaatagctcgaggatccagaggtcgatcgtcgaa
aggactgcggtatcgaacatcacgtttgacgtctcgacgttggtacgcgctaacgcaatc
gacatacacgcgccagtaatgtacgcggagcccgttcgcacgcaaacggccgtggcgttc
agcggagaggtatttccatatgctctgatcatcatagcctgcgtcatcctcatactcggg
atcgctggaataatctacatcagcgtgtcttggtccaggtacaaggcgtacaaggagcga
atgcaacggatgtatgttgtacctcgttacgatcccgtctacgtcgagcccaatttaaag
gaatacgagacgcaggtgctccaaatgagcgtgcccgtcgacgacaacgacagttacaac
gacttgcaactcgactttagcaacaagaatcatgccttcagtttggacaacgttagttat
attaccaaagaccacggtgggagtacaggtcaacaaagtcctgtgagctcggaagctgcg
accacggctcgggcctcgagtatagccgggaatcatgcggagggtaacgttcattccctt
cgacgatcgactctcggtcgtaagaaccacacgaccagcaacagcaacaccatgaacaat
cacgacaccaccacgcccgtcctcaatcctctctacaatcacggcggtgatctactcagc
gcgagtccttccaacgataacgttacgttccgagaaaagaaggactactctcatctcgga
tttacttacttgtacgagcagagccccgtcgaaaccaccactgaattgtaa
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integrated database retrieval system
