Vespula pensylvanica (western yellowjacket): 122637057
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Entry
122637057 CDS
T07720
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
122637057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vps03400
]
122637057
Enzymes [BR:
vps01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
122637057
DNA repair and recombination proteins [BR:
vps03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
122637057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_A_C
RNA_ligase
BRCT_2
DNA_ligase_IV
RSV_NS2
MCP-like_PDC_1
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
122637057
NCBI-ProteinID:
XP_043684853
LinkDB
All DBs
Position
24:complement(2531433..2536125)
Genome browser
AA seq
899 aa
AA seq
DB search
MSVSLSSRITFKKLCDVLEKVIKARASGKLEILQEFIMQCQREGVKLKEDNPDADISIFP
VLRLLLPQCDRERSSYNLKQKLLANIYIRVLCLGKSSKDAQKLINYRIPDLSKSEGSDIS
EIVYSIVRKQLSHRKESFTIDRINIFLDDISQASKMNSSKDELFKALFRQITALELKWLT
RIILKDLKLGVGTKRLLQVYHPEAYECFDTTSDLREICDNLGQGKKKVNHNIQVFSFFKP
MLLERCAIENASKLFYNNDEYFVQMKFDGERSQIHMKDGIFQYCTRQRFDITNNWGYGKS
NSDGFLTSTFSRRLNRQCKSIILDGELMGWHKQKKVFGSKGMNYDVKKLTANSSYQPCFV
AYDIILYNDKLLVNLPYRERLTILNDAFQDEEGSLIKCQSTIISNSKDLLDIFNKSLNNN
EEGIVLKKSDFIYKPNVREGTGCYKLKAEYSGNLVQDIDLIVLGGYYGEGKFSGLIKSFM
MGVAKMPENEEKELTQFFSVVSVSNGIAMEKLKELDSKLERYWIKDCPNCVIGPKGQPPD
LWIRPEHSLILTLRATEIVKTNDYPIGYTLRFPRVIQIREDKPWDSACTVTEFLSLIKNE
EIIHKLTKRQATLNDVETPTIKIKKRISKLTSSKFEEGFYNTKQSNTNLVPITRLLYGKE
ICVINGNNEISKEEIEDTLLLHNAKVVQNPSKETYCVIVGNDKKAKARNIIQSKKYDIVT
IDWYKRIIKEENWGALESFFPWDLLCVRDSTKRSLIEKYDDYYDSYTTDANEESLQRSLK
QMEYTIKDGEVAFTEEQEMDKELFENGISPFSIFKQIIGYFKKCSDPTKFKFRFMGGTIK
EDIDEYVNYIFIEDNSLMSTISSEVDETINRSMKVINSKWIKDCFRDQKFYSIDEYIIG
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtatcattatcttcaagaattacatttaaaaaattatgcgatgtcttagaaaaa
gttattaaagcccgtgcctctggaaagcttgaaattctacaagaatttattatgcaatgt
cagagagaaggtgttaaattaaaagaagacaatccagatgcagatatttcaatatttcct
gtgttaagactgcttttaccacaatgcgatcgtgaacgttcgtcatataatttgaagcag
aaattactagcaaatatttatattcgtgtactttgccttggaaaatcaagtaaagatgct
cagaaactgataaattatagaatacctgatttaagtaaatctgaaggaagtgacatttct
gaaatagtttactcaattgtgcggaaacaattgtcacatcgaaaggaatcatttacaata
gatagaataaatatattcttagatgatatatcacaagcaagtaaaatgaatagtagtaaa
gatgaattatttaaagcactatttagacaaataactgcattagaattaaaatggttaact
cgtattattttaaaggatctaaagttaggtgttggaacaaaaagattgttgcaagtttat
catccagaagcatatgaatgttttgatacaacttctgacttacgagaaatttgtgataat
cttggtcaaggtaaaaagaaagttaatcataatattcaagttttctctttttttaaacct
atgcttttggaaagatgtgctattgagaatgcttcaaaacttttttataataatgatgag
tattttgtacaaatgaaatttgatggtgaacgttctcaaatacatatgaaggatggtata
ttccaatattgtacaagacagagatttgatatcacaaataattggggatatggaaaaagt
aattcagatggttttcttactagtacattttcgcgtcgtttaaatcgacaatgtaagtct
ataattctggatggtgaattaatgggttggcataaacaaaaaaaagtgtttgggtcaaaa
ggtatgaactatgatgttaaaaagcttactgctaatagttcctatcaaccctgttttgtg
gcatatgacattattctatataatgacaaattgctcgtgaatttaccctatagagagaga
ttaactatattaaatgatgcatttcaagatgaagaaggttcattaattaaatgtcaaagt
acaatcatttctaacagtaaagatttattggatatttttaataaaagtcttaataataac
gaagaaggaatagttttaaaaaaatctgattttatttataaaccaaatgttcgcgaagga
actggttgttacaaattaaaagctgagtattcagggaatctagtacaagatatagacttg
attgttcttggaggctattatggcgaaggaaagttcagtggtttgataaaaagctttatg
atgggtgttgccaaaatgcctgaaaacgaagaaaaagaacttacacaatttttctcagtt
gtgtccgtgagtaatggtattgcaatggaaaaactgaaggaacttgattcaaaattggag
aggtattggattaaagattgtcctaattgtgtaattggacctaagggacagcctccagat
ttatggattcgacctgagcactcattgattttaacgcttcgagcaacggaaatagtaaaa
actaatgattatccgattggttatactttacgttttccgcgtgttatacagattagagaa
gataagccttgggatagtgcttgtactgtcacagaatttttatcattgataaagaatgaa
gaaataattcataaattgactaaaagacaggcgacattgaatgatgttgaaacaccaact
attaaaataaaaaagagaatatcaaagttgacttcgtcaaagtttgaagaagggttttat
aatacaaaacaatcaaatacaaatcttgtaccgatcacgcgtttattatatggaaaagaa
atttgtgttattaatggtaataacgaaatatccaaagaagaaatagaagatacgctctta
ttacataatgcaaaagtcgtacagaatccgagtaaagaaacttattgtgtgattgttgga
aatgataaaaaagcaaaagcaagaaacataatacaaagtaagaaatatgatatagttacg
atagattggtataaacgtattatcaaagaagaaaactggggtgcattagaaagttttttc
ccatgggatcttctgtgcgttcgtgattcaaccaaacgatcgcttattgaaaaatatgat
gattattatgatagttatacaacagatgccaatgaagaaagtttacaacgatctttaaaa
cagatggaatatacgataaaagacggagaagttgcatttaccgaagagcaagaaatggat
aaagaattatttgaaaatggaatatctccattttctatcttcaaacaaattattggatat
tttaagaaatgttcggatcctacgaaatttaaatttcgctttatgggaggtacaataaaa
gaagatatagatgaatatgttaattatatcttcattgaagataattcattgatgtctacg
atatcttcggaagttgatgaaactataaacagatctatgaaagtaatcaatagtaaatgg
ataaaagattgttttcgagatcaaaaattttattcgatcgatgaatatattattggctaa
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