Vibrio qinghaiensis: CCZ37_14275
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Entry
CCZ37_14275 CDS
T05259
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
vqi
Vibrio qinghaiensis
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vqi03009
]
CCZ37_14275 (rumB)
Enzymes [BR:
vqi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
CCZ37_14275 (rumB)
Ribosome biogenesis [BR:
vqi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CCZ37_14275 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
MTS
Methyltransf_25
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_12
Methyltransf_11
Methyltransf_32
Ste5
TehB
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
ASU23758
UniProt:
A0A223N1X0
LinkDB
All DBs
Position
2:205893..207056
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AA seq
387 aa
AA seq
DB search
MAVPIMQCAFFDQQLCRSCTHCAVSYSEQVKRKDLALKALFSTQMPQQWLEPVISEETGF
RNKAKMVALGAAHAPILGVESMVDGQSTPVSLVQCGLYPQETQTLLTYLQDWIRSSGIPP
YNKTKKKGELKYILLTRSEYSGEFMLRFVLRSREALGRVEQNLARLQAQFPTIRVVSVNL
QPIHMARLEGEEEIFLTESEYLIEQFNQVPMVIRPKSFFQTNPHVAKQLYAAARDWVREI
NPSYMWDLFCGVGGFALHCASSTTAVTGIEIEPEAIASAKRSAKTMGITNLDFAALDSAQ
FSQAQSIAPELVLVNPPRRGLGAELVERLVALSPKHIIYSSCNPQTLITDIQGMVGYLPK
KLQWFDMFPHTDHSEVMVLLERQPKSR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
ttggcagttcccattatgcagtgtgcgttttttgatcaacagctgtgccgttcttgtact
cattgcgcggtttcttattcagagcaggtgaagcgcaaagatttggcactaaaagcgctg
ttttcaacgcagatgccacagcagtggctagaacctgtcataagtgaagagacgggtttt
cgtaacaaagcgaaaatggtggctcttggcgcggcccatgcaccgattttgggtgttgaa
tctatggttgatgggcaatcaacgcccgtgtccttggtgcaatgtggcctctacccacaa
gagacacaaacgctattaacttatctacaagattggatccgcagctcgggcattcccccc
tataataaaaccaagaagaaaggcgaactcaaatacatattgctcacacgcagcgaatat
tcaggtgagtttatgctgcgtttcgtactgagaagccgcgaagctttaggccgagttgag
caaaacctcgcgcggcttcaggcgcagtttccaaccattcgcgtcgtctcagttaacctt
caacccatccacatggcgcgcctagaaggtgaagaagagatttttttaaccgagagtgag
tatttgattgagcagtttaatcaggtgcctatggttatccgcccgaaaagttttttccaa
accaacccgcatgtagctaagcagttgtacgcggcggcgcgtgattgggtgagagagata
aacccaagctatatgtgggatctgttttgtggcgtgggcggttttgccctacattgtgcc
agttcaactacggcagtcacaggcattgaaattgaaccagaagcgattgccagtgctaaa
cgctctgccaagacgatgggcattaccaatttagattttgctgcgctggattctgcccaa
ttctcacaggctcaatcaatcgcgcctgagctggtgctagtcaaccctccgcgtcgtggt
ttaggagctgaattagttgagcgattggtggctttatcacccaaacacatcatttactca
agctgtaacccgcaaacgctaatcactgatatacaaggtatggtgggctacttacccaaa
aaactgcaatggtttgatatgtttccacataccgatcatagcgaagtgatggtgctgtta
gagcgtcagcctaagtcgagataa
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