Vigna radiata (mung bean): 106772015
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Entry
106772015 CDS
T04126
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106772015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106772015
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106772015
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_23
AAA_29
AAA_30
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
106772015
NCBI-ProteinID:
XP_014513606
UniProt:
A0A1S3V5I0
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Position
8:30873428..30876031
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AA seq
325 aa
AA seq
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MAGNGTHSDSKAATIVIKDLKFTYPGIDGHPPPGSLPLIQNFSLTLGSGDRSLLVGSNGA
GKTTILKILGGKHLVEPDMVRVLGRSAFHDTTLVSSGDLCYLGGEWRRDVAFAGFDVPIQ
MDVSAEKMIFGVAGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLL
LDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLEDWPTHIVYVAHGKLQLAM
PMEKVKEISKLSLMRTVESWLRKERDEDRRKRKERKAAGLPEFGKQIEGSRVTGATNNGW
AAGRLNSTVAGEENFIFSSNRVLRQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggccggtaatgggacccattcagattcaaaagctgcaacaattgtcattaaagatctc
aaatttacataccccggcatcgacggccacccgccgcccggttccttgccgctcattcaa
aacttttctctcactctcggttccggcgaccgctcccttctcgtcggttccaacggcgcc
gggaaaaccacgatcctgaagatactaggagggaagcacttggtggaacctgacatggtt
cgcgtgcttggaagatcagcttttcacgacaccactttggtgtcttctggtgatctctgt
tatctcggtggcgagtggaggcgagatgttgcttttgcgggttttgatgtgccaatacag
atggacgtttctgctgaaaaaatgatatttggtgtggctgggattgatcctcaaagaaga
gcggagctcatcaaggtattggacattgatctttcctggagattgcataaagtatctgat
ggtcaaagaagaagagtacagatttgtatgggtcttctcaaaccgttcaaggttcttctt
cttgatgagataactgttgaccttgatgttctagcaagagctgaccttcttagatttcta
agaaaggaatgtgaagagaggggtgccaccattatctatgcaacacatatatttgacggt
cttgaggattggcctacacatattgtgtatgtagcccatggaaagctgcaactagcaatg
cctatggagaaagtcaaagaaattagcaaattgtcactaatgagaacagtagaaagttgg
ctgcggaaggaacgagatgaagatagaaggaaaagaaaagaaagaaaagcagctgggctt
cctgaatttggaaagcaaattgagggaagccgtgtaacaggggcaactaataatggttgg
gcagcaggacgattaaattccaccgttgctggtgaggaaaacttcatcttcagctctaat
cgagtactgaggcagtag
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