Vigna radiata (mung bean): 106775682
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Entry
106775682 CDS
T04126
Name
(RefSeq) 5'-3' exoribonuclease 4-like
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
106775682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106775682
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
106775682
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
106775682
NCBI-ProteinID:
XP_014518319
UniProt:
A0A1S3VJQ0
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All DBs
Position
10:12240947..12252707
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AA seq
955 aa
AA seq
DB search
MGVPAFYRWLADRYPLSIVDVVEEDTAAGEGAVDVSKPNPNGMEFDNLYLDMNGIIHPCF
HPDGKPAPATYEDVFKIMFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRAAK
DAAEAEAEKERLREEFEGEMELLSSKDKPETYDSNVITPGTPFMAVLSVALQYYIQTRLN
YNPGWINTKVILSDSNVPGEGEHKIMEYIRSQRNLPGFNPNTRHCLYGLDADLIMLALAT
HEVHFSILREVITFPGQQDKCYQCGQIGHFAADCRGKPGEKPEDWNPVDDAPVHKKKYQF
LNIWVLREYLQYEMEIPNPPFEIDFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAVNLL
MHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIFQKRVRIQQATEINEEMRAR
ARGEMPEEPRASVSDKVKLGEPGYKERYYAEKFGALNLEEIDKIKKDTVLKYVEGLCWVC
RYYYQGVCSWQWYYPYHYAPFASDLKDLADLEITFFLGEPFKPFDQLMGTLPASSSSALP
EKYRDLMTDPSSPILEFYPADFEIDMNGKKYAWQGVAKLPFIDEKKLLSATSKLEGTLTV
EEQLRNSKMLDLLYVNRAHNLAPYILSYYQYSCQFSLHDRPAVPIDPSVSDGMNGHLWLY
ERNVLRTIVSSPIKGLQDIEYNQVLNITYLNPRKHRHIPRPPNGVQMPIKILKAIDIKPF
PVLWHEENSGRRHGRERPQLHGAMAGPQLGEAAHRLVKNTLNIKPNNATYGFPEQLPGHH
AMNRVLRSPGPSGPGKYYAEDTSGYYGHHYNHQGMMPRPRYPVSSNGGYNDKQNFRIQDR
SQYHEQHYYNGRTGFHTFTMEEGPRPRPYAVPPPKTPVVMLSRPPNSGPTTNLQQQFVGP
PIPPPNWITRAPDTNGIYARHQEVAIGGAYDNKHMKKVYQVRSRQPQDMPEYGNQ
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgccagcgttttaccggtggctcgcggatcggtacccgctctcgatcgtcgac
gttgtggaggaggacaccgccgccggcgaaggcgctgttgatgtttctaaacctaatcct
aatggcatggagttcgacaacttgtacttggacatgaacggcatcattcacccctgtttt
catcctgacggcaagccggcacctgctacctatgaagatgtattcaaaataatgtttgac
tacattgaccatctattttcattggttcgcccaaggaagcttctttatctcgcaattgat
ggtgttgcaccaagagccaaaatgaatcagcaacgatcacggcgattccgagcagcaaaa
gatgcagctgaggctgaagctgaaaaggaaagactcagggaagaatttgagggtgagatg
gaactcttgtcttctaaagacaagcctgaaacctatgactcaaatgtcattacccctggc
actccatttatggcagtgttgtcagtggctcttcagtattatatacagactagattaaat
tacaaccctggctggataaatacaaaggttatactttctgattcaaatgttcctggtgag
ggagaacataaaataatggaatacataagatcacaacgtaaccttccaggatttaatcca
aatactcgtcactgtctgtatggattggatgctgatttgattatgttggccttagccaca
catgaggttcatttctccatattaagggaggtaattactttccctggacaacaggacaag
tgttatcagtgtgggcaaattggccattttgcagctgattgtcgtggtaagccaggtgag
aaacctgaggactggaatccagttgatgatgccccagttcacaagaagaaatatcagttt
cttaacatctgggtgctgcgtgaatatttgcaatatgaaatggagatccccaaccctcct
tttgagattgactttgaacgcatagtggatgattttgtatttctatgcttctttgttggc
aatgactttcttcctcacatgccaacattagaaatacgtgagggggctgtcaacttattg
atgcatatttatagaaaagaattcactgccatgggtggttatcttactgaagcgggtgag
gttttcttagagagagtggaacattttattcagtctgttgctgttcatgaagatcaaata
tttcagaaacgagttcgcattcaacaggctacagaaattaatgaagagatgagagctagg
gcaagaggagaaatgcctgaagaaccacgagcatctgtttcggacaaggttaagttagga
gagcctggatacaaggaaaggtattatgcagaaaaatttggtgcattgaatctggaggag
atcgacaaaatcaagaaagatacagtcttgaaatatgtagaaggcctttgttgggtttgt
cggtattactaccagggtgtctgctcatggcaatggtactacccataccactatgctcct
tttgcttctgatcttaaagatctagctgatctggagataactttttttttgggagaacca
tttaagccatttgatcaactaatgggaaccctacctgcatcaagttcaagtgcactgcct
gaaaaatacagggatttgatgactgatccttcatcacctattcttgaattctaccctgct
gattttgagattgatatgaatggcaaaaaatatgcatggcagggcgttgccaagttgccg
ttcattgatgagaaaaaattgctctctgccacaagcaagcttgaaggaacattaacggtg
gaggaacagctccgaaatagtaagatgcttgatttgctttatgtcaacagagcgcataat
ttggctccatatatcttatcgtactaccaatattcttgtcaattctctctgcatgacaga
cctgctgtacctattgacccaagtgttagtgatggtatgaatggacacctctggttgtat
gaaagaaatgtgctcagaaccattgtatcctctcccatcaagggattgcaagacattgag
tacaatcaagttttaaatattacctatcttaatcctcgtaaacatagacatattccaaga
cctccaaatggtgtacaaatgccaataaagatattaaaagccattgatattaaacctttt
cctgtgttatggcacgaagaaaatagtggtcggcgtcatggcagagaaagaccacaacta
cacggagcaatggctgggcctcaactgggggaagcagcacatcgtcttgtgaagaacacc
cttaatattaaaccaaataacgcaacatacggattcccagagcagcttccaggccatcat
gcaatgaacagggtgcttagatcaccaggaccatctggacctggtaaatattatgccgag
gacacaagtggttattacggacatcattacaatcaccagggcatgatgcctagacctaga
tatccagtctcatccaatggtggatataatgacaaacagaattttaggatacaggatagg
tcacagtatcatgaacaacattactacaatgggagaactgggttccatacttttacaatg
gaggaaggcccaagaccaaggccatatgcagtgcctccaccaaagacacctgtggtgatg
ttatcaaggccacccaattcaggaccaacaactaatctgcaacagcaatttgtgggtcct
cctataccacctccaaactggattactagagcacctgatacgaacggaatatatgctagg
catcaagaagttgcaattgggggagcttacgataataagcacatgaagaaggtgtaccaa
gttagaagtcggcaaccccaagatatgccagagtacgggaatcagtag
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