Veillonella rogosae: OKW85_03935
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Entry
OKW85_03935 CDS
T08601
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vrg
Veillonella rogosae
Pathway
vrg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OKW85_03935 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vrg03400
]
OKW85_03935 (nth)
Enzymes [BR:
vrg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OKW85_03935 (nth)
DNA repair and recombination proteins [BR:
vrg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OKW85_03935 (nth)
Prokaryotic type
OKW85_03935 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UZG51755
UniProt:
A0AA46X430
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All DBs
Position
891136..891771
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AA seq
211 aa
AA seq
DB search
MRVTKAIKAEQLKLLQEHYFDAKPALEYTNEFELLVAVVLSAQCTDERVNIVTKRLFPEL
NHPAKMLAIGVTKLETLIKDCGLYKSKAKNLIATCQILVDQYHGEVPREFDQLVELPGVG
RKTANVVVSVLFGTPAIAVDTHVFRVSNRLKLGIAKTPEEMELKLQKAIPKEDWAAAHHW
LIYHGRKVCKARKPLCDDCFLNHLCPSAGKV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtaacaaaagcaataaaggcagagcaattaaaactattacaagagcattatttt
gatgcaaaacctgcccttgagtatacaaatgaatttgaattattagtagctgttgttttg
tccgctcaatgtacggatgaacgggtaaatatcgtaactaaacgattgttccctgaatta
aatcatccagctaagatgttggctattggcgtcactaagctagaaactcttattaaggat
tgtggtctttataaatcgaaggctaaaaacttgattgctacatgccagattttagttgac
caatatcatggagaggtacctcgtgagtttgatcaactcgttgaattgcctggtgtaggt
cgcaagacagcgaatgtggtagtatcagtactgtttggtacaccagccattgcggtagat
actcatgtctttcgtgtatcaaatcgactaaaactaggtattgcaaagacgccagaagag
atggagttaaaattgcaaaaggctattccaaaagaggattgggctgctgcacatcactgg
ttaatttatcatggtcgtaaagtatgtaaggctcgcaagcctttatgtgacgactgtttc
ttaaatcatctatgtccttctgcaggaaaggtttaa
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