Vitis riparia (riverbank grape): 117905657
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Entry
117905657 CDS
T07274
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic-like
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00906
Carotenoid biosynthesis
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
117905657
Enzymes [BR:
vri01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
117905657
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
FAD_binding_2
GIDA
FAD_binding_3
NAD_binding_8
Thi4
Pyr_redox
Pyr_redox_3
FAD_oxidored
Peptidase_C16
Motif
Other DBs
NCBI-GeneID:
117905657
NCBI-ProteinID:
XP_034674432
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Position
18:complement(29168138..29171757)
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AA seq
358 aa
AA seq
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MFYSLLEVSFIRFMQQDQLGLLEEQLLLLCYQHAAYFVADPDYFVFHYPYNKYLKQLPQI
SIEDGTLDLVVIGCGPAGLALAAELAKLGLSVGLIGPDLPFTNHYGVWEDEFKDLGLGRC
IERVWQDTIVYLDDGDQILIGRAYGRVNRHLLHEELLKRCLESGVSYLSSKVERITEASN
GHSLVVCERDIVIPCRLATVASGAASGKLLQYEVGGPRVSVQTAYGVEVEVENNPYDPSL
MVFMDYRDHIKQKVQCLEVQYPTFLYVMPMSPTRVFFEETCLASKDAMPFDLLKKKLMSR
LETMGIRIIRTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPEKQRRNRGETGLVP
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgttctattccttactggaggtttcctttatcaggtttatgcagcaggaccagctaggc
ctactggaggagcagctgctattgctatgctatcaacatgctgcctacttcgttgctgat
cctgactacttcgtatttcactatccatataataagtacttgaagcagttaccgcagata
tcaattgaagatggtacattggatttagtggtgattggttgtggcccagctggtctcgct
ttggctgcggaattagcaaagttaggattgagtgttgggcttattggtccagatcttcct
ttcacaaatcattatggcgtatgggaggatgaatttaaagatcttggccttgggaggtgc
attgagcgtgtttggcaggataccattgtatatcttgatgatggtgatcaaattttgatt
ggtcgtgcttatggacgagtcaatcgacatttgctccatgaggaactgttgaaaaggtgt
ctcgagtcaggtgtttcatatcttagctcaaaagtagaaaggattacagaagcttccaat
ggtcatagtcttgtagtttgtgaacgtgatattgttatcccctgcaggcttgctactgtt
gcatctggggctgcttcagggaaactcttacagtatgaggtgggtggtcccagggtttct
gtccaaacagcttatggggtggaggttgaggtggaaaacaatccatatgatccaagtctg
atggttttcatggactacagagaccacattaaacaaaaagttcaatgtttagaagtgcaa
tatccaacatttctctatgtcatgcccatgtcaccaacaagagtcttctttgaggaaact
tgtttggcttcaaaagatgctatgccttttgatctactaaagaaaaagctcatgtcaagg
ctagagacaatgggaatacgaattataagaacttatgaagaggaatggtcttatatccct
gttggtggatccttaccaaatacagagcaaaaaaaccttgcatttggtgctgctgctagc
atggtacatccagagaaacagaggagaaacagaggagaaaccgggctggtgccctaa
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