Vitis riparia (riverbank grape): 117907400
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Entry
117907400 CDS
T07274
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic-like
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00906
Carotenoid biosynthesis
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
117907400
Enzymes [BR:
vri01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
117907400
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
FAD_binding_2
GIDA
FAD_binding_3
NAD_binding_8
Pyr_redox
Thi4
Pyr_redox_3
FAD_oxidored
Peptidase_C16
Motif
Other DBs
NCBI-GeneID:
117907400
NCBI-ProteinID:
XP_034676827
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Position
18:7749276..7752895
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AA seq
339 aa
AA seq
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MFYSLLEVSFISQHAAYFVADPDYFVFHYPYNKYLKQLPQISIEDGTLDLVVIGCGPAGL
ALAAELAKLGLSVGLIGPDLPFTNHYGVWEDEFKDLGLGRCIERVWQDTIVYLDDGDQIL
IGRAYGRVNRHLLHEELLKRCLESGVSYLSSKVERITEASNGHSLVVCERDIVIPCRLAT
VASGAASGKLLQYEVGGPRVSVQTAYGVEVEVENNPYDPSLMVFMDYRDHIKQKVQCLEV
QYPTFLYVMPMSPTRVFFEETCLASKDAMPFDLLKKKLMSRLETMGIRIIRTYEEEWSYI
PVGGSLPNTEQKNLAFGAAASMVHPEKQRRNRGETGLVP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgttctattccttactggaggtttcctttatcagtcaacatgctgcctacttcgttgct
gatcctgactacttcgtatttcactatccatataataagtacttgaagcagttaccgcag
atatcaattgaagatggtacattggatttagtggtgattggttgtggcccagctggtctc
gctttggctgcggaattagcaaagttaggattgagtgttgggcttattggtccagatctt
cctttcacaaatcattatggcgtatgggaggatgaatttaaagatcttggccttgggagg
tgcattgagcgtgtttggcaggataccattgtatatcttgatgatggtgatcaaattttg
attggtcgtgcttatggacgagtcaatcgacatttgctccatgaggaactgttgaaaagg
tgtctcgagtcaggtgtttcatatcttagctcaaaagtagaaaggattacagaagcttcc
aatggtcatagtcttgtagtttgtgaacgtgatattgttatcccctgcaggcttgctact
gttgcatctggggctgcttcagggaaactcttacagtatgaggtgggtggtcccagggtt
tctgtccaaacagcttatggggtggaggttgaggtggaaaacaatccatatgatccaagt
ctgatggttttcatggactacagagaccacattaaacaaaaagttcaatgtttagaagtg
caatatccaacatttctctatgtcatgcccatgtcaccaacaagagtcttctttgaggaa
acttgtttggcttcaaaagatgctatgccttttgatctactaaagaaaaagctcatgtca
aggctagagacaatgggaatacgaattataagaacttatgaagaggaatggtcttatatc
cctgttggtggatccttaccaaatacagagcaaaaaaaccttgcatttggtgctgctgct
agcatggtacatccagagaaacagaggagaaacagaggagaaaccgggctggtgccctaa
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