Vitis riparia (riverbank grape): 117909621
Help
Entry
117909621 CDS
T07274
Name
(RefSeq) homogentisate 1,2-dioxygenase
KO
K00451
homogentisate 1,2-dioxygenase [EC:
1.13.11.5
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00350
Tyrosine metabolism
vri01100
Metabolic pathways
Module
vri_M00044
Tyrosine degradation, tyrosine => homogentisate
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
117909621
Enzymes [BR:
vri01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.5 homogentisate 1,2-dioxygenase
117909621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HgmA_N
HgmA_C
Cupin_6
Motif
Other DBs
NCBI-GeneID:
117909621
NCBI-ProteinID:
XP_034679589
LinkDB
All DBs
Position
19:complement(2376015..2379844)
Genome browser
AA seq
463 aa
AA seq
DB search
MDGQSVSKTNDSDLPSDLQYQFGFGNHLSSEAIAGALPRGQNNPLTCPLGLYAEQISGTP
FTAPRKQNQFSWLYRIKPSVTHEPFKPRVPSHGKLVSEFNQSNSSTNPTQLRWKPVEIPD
SPTDFIDGLYTVCGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLIVPQKGRLSITT
ECGKLQVSPGEIVVLPHGFRFVVDLPDGPSRGYVAEIFGAHFQLPDLGPIGANGLAASRD
FLVPVAWYEECSRPGYTIVQKFGGELFTAKQDFSPFNVVAWHGNYAPYKYDLSKFCPVNT
VLKDHADPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIY
GGYEAKADGFLPGGASLHSCMTPHGPDTKTFEATIAHGKDAGPFRITNTMAFMFESCLMP
RICPWALDTPSIDHDYYQCWVGLRSHFSREEASDESQTIQNGH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggatggtcaatcggtcagcaaaacaaacgactcggatcttccgtcggatctccagtac
caattcggcttcggcaaccatctctcgtctgaggcgatcgcaggagctctccctcgcggc
cagaacaaccctctcacctgccccctcggcctctacgctgagcagatctctggcaccccc
ttcaccgcccctcgcaagcaaaaccagttcagttggctttatcggattaaaccatcagtc
acccacgagccatttaaacctcgagtccccagtcatgggaagcttgtcagtgaatttaac
cagtcgaacagttccactaacccaactcaactacggtggaagcctgtggagattcctgat
tcccctactgattttattgatgggttatacacagtttgtggcgcaggcagttcattcctt
cggcatggatatgctattcacatgtacactgccaacaaatccatggacaattgtgctttc
tgcaatgctgatggggacttcttgatagtcccccagaaaggaaggctgtcaatcactacc
gaatgtggcaaattgcaagtgtctcctggtgaaattgttgttctacctcatggattccgt
ttcgttgttgatctaccagatggcccatcacgcggttatgttgctgagatttttggtgcc
cattttcaacttcccgatcttggcccaataggtgctaacggtcttgctgcttcaagagat
tttcttgttcctgtagcctggtacgaggagtgttcccgtccaggttacactatcgtacaa
aagtttggtggtgaactctttactgcaaaacaagatttttctcccttcaatgtggttgct
tggcatggtaactatgcgccatataagtatgatctaagtaagttctgccccgtcaatacc
gttttgaaagatcatgctgatccgtctataaatacagtgctgacagcaccaactgataaa
cctggtgtggctttgcttgattttgtcatttttcctcctagatggttggttgccgagcat
accttccgacctccttattaccaccgcaactgtatgagtgaatttatgggcctgatttat
ggtggatatgaggcaaaagccgatggcttccttcctggtggtgctagtctgcacagctgc
atgactccccatggtcctgataccaagactttcgaggctaccattgctcatgggaaggat
gcaggacctttcaggataaccaataccatggctttcatgtttgagtcatgtctaatgcct
cgtatctgcccatgggctcttgacactccctcgatcgatcatgattattaccagtgttgg
gtcggactaagatctcatttctcgcgtgaagaagccagtgacgaaagccaaacaatccag
aatgggcactag
DBGET
integrated database retrieval system
