KEGG   Vitis riparia (riverbank grape): 117912889
Entry
117912889         CDS       T07274                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-3-like
  KO
K07936  GTP-binding nuclear protein Ran
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03008  Ribosome biogenesis in eukaryotes
vri03013  Nucleocytoplasmic transport
vri03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117912889
   03008 Ribosome biogenesis in eukaryotes
    117912889
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117912889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vri03019]
    117912889
   03009 Ribosome biogenesis [BR:vri03009]
    117912889
   03016 Transfer RNA biogenesis [BR:vri03016]
    117912889
   03036 Chromosome and associated proteins [BR:vri03036]
    117912889
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vri04147]
    117912889
   04031 GTP-binding proteins [BR:vri04031]
    117912889
Messenger RNA biogenesis [BR:vri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     117912889
Ribosome biogenesis [BR:vri03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    117912889
  Pre-60S particles
    117912889
Transfer RNA biogenesis [BR:vri03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    117912889
Chromosome and associated proteins [BR:vri03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     117912889
   Spindle formation proteins
    117912889
Exosome [BR:vri04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117912889
GTP-binding proteins [BR:vri04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    117912889
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_7 AAA_22 AAA_16
Other DBs
NCBI-GeneID: 117912889
NCBI-ProteinID: XP_034683564
LinkDB
Position
4:4798004..4801992
AA seq 221 aa
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDVNLHFV
ESPALAPPEVQIDMAAQAHHEAELAAAAAQPLPDDDDDTFE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcgcttccaaatcagcaaactgtggattaccctagcttcaagctcgtgattgtcggt
gatggcggaacaggaaagactacatttgtgaaacggcatctcactggagagtttgagaag
aaatatgagccaaccattggtgtggaagttcacccattggacttcttcacaaactgtgga
aagattaggttctattgctgggatacagctgggcaggaaaaattcggtgggctcagagat
ggatactatattcatggacagtgtgccatcatcatgtttgatgtcactgctcgtctgaca
tacaaaaatgttccaacatggcatcgggatctctgcagggtgtgcgagaatattccaatt
gttttatgtggaaacaaggtggatgtgaaaaataggcaggtcaaagcaaagcaggttact
ttccacaggaaaaagaatctccagtactatgaaatttctgcaaagagcaattataacttt
gagaagcccttcttgtaccttgctcgaaaacttgcaggagatgtcaatctccactttgtt
gagtcacctgctcttgctcctcctgaagttcaaattgatatggctgcacaagctcaccat
gaagcagagttggcagcagccgcagcacaaccacttcctgatgatgatgatgacacgttt
gagtag

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