Vitis riparia (riverbank grape): 117917632
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Entry
117917632 CDS
T07274
Name
(RefSeq) (-)-kolavenyl diphosphate synthase TPS28, chloroplastic-like
KO
K04120
ent-copalyl diphosphate synthase [EC:
5.5.1.13
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00904
Diterpenoid biosynthesis
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Module
vri_M00927
Gibberellin A12 biosynthesis, GAPP => GA12
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00904 Diterpenoid biosynthesis
117917632
Enzymes [BR:
vri01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.13 ent-copalyl diphosphate synthase
117917632
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Gene cluster
GFIT
Motif
Pfam:
Terpene_synth
Terpene_synth_C
Motif
Other DBs
NCBI-GeneID:
117917632
NCBI-ProteinID:
XP_034689860
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Position
7:29155347..29160866
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AA seq
710 aa
AA seq
DB search
MLSSMEDGEISISAYDTAWVALVKDINGTDTPQFPSSLLWIANNQLEDGSWGDVHFFSPY
DRILNTLACVIALKSWNIHPEKFEKGMSFIRENICKLEKEKAEHMPIGFEVAFPSLLEIP
EDMGIEVPDDSPVLQEIYAQRDLKLKKIPKDIMHRVPTTLLFSLEGMPGLDWEMLLNLQF
QDGSFFFSPSSTAYALMHTKDEKCLTYLNKVVERFNEGVPNTYPVDMFERMWGVDRLQRL
GISRYFEPEIKVCMNYVYRYWNKNGICSARNTRVSDVDDTSMGFRLLRLHGYDVSPDVFK
QFEKGDEFVCFPGQSSQAITGLFNLFRASQFLLPGEKILENARKFCSKFLREKQTCNQLE
DKWIIAKDLAGEVGYALDIPWYASLPRVETRFYVEQYGGGDDIWIGKTFYRMYLVNNDVY
SELAKLDFNNCQELHQLEWDRIQEWWTHSHLQEFGLSRETLLLAYFLAAASIFEPERSVE
RVAWAKAAVLVEAVASYFNKETCIKQRRAFLLKFGYSASGGRYMKINGSSNLSKTGEELA
GLLLTTLNQLSLDAQELHGCDIRQLLHHTWEMWLTKNLAEEDGCQGEAEVLVDVINLCSG
RSITEELLNHPLYKHLLHLTNGVSHQLSPFYQHKAHIRSYNPEKGSDVSSKVEPDMQELA
QLVLQNSTEDIDPVIKRTFLMVAKSFYYAAYCDPATIDSHIAKVLFERVV
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttgagttccatggaggatggagagataagcatatcggcttatgacactgcatgggtg
gctcttgtgaaggatattaatggaactgatacacctcagtttccatctagccttctgtgg
attgccaacaatcagctcgaggatggatcatggggcgatgtccacttcttctccccttac
gatagaatactgaacacgttggcatgtgtcatagcattgaaatcgtggaatattcatcca
gaaaaattcgaaaaaggcatgtcattcatcagagagaacatatgcaaacttgaaaaagag
aaggctgagcacatgcccattggattcgaagtagcttttccttcactccttgaaatacct
gaggacatgggtattgaagttcctgacgattcacctgtcttgcaagagatctatgctcag
agagatctaaagctcaaaaagataccaaaggacatcatgcatagggtgcccacaacactg
ctcttcagcctggaaggaatgccaggcctggactgggaaatgcttctaaacctacagttc
caagatgggtccttttttttttctccatcttccactgcctatgcactcatgcacaccaaa
gatgagaaatgtttgacatatctaaataaggttgttgagagattcaatgagggagtcccc
aatacttacccggttgatatgttcgagcgcatgtggggtgttgatcggctgcagcgcctt
ggaatatctcgatattttgagccagaaatcaaagtgtgtatgaactatgtatacagatat
tggaacaaaaatggaatatgctcggcaagaaatactcgggttagtgatgttgatgacaca
tcaatgggctttaggcttctaagattacatggctacgatgtttctccagatgtgttcaag
cagtttgagaagggtgatgagtttgtctgcttcccagggcagtcatcccaggccattacc
gggttgtttaacctctttcgtgcttcccagtttctgctccccggagaaaagattcttgag
aacgccaggaagttttgttccaagtttctcagagaaaaacaaacttgtaatcagctcgaa
gataaatggataatagcaaaggatttggctggtgaggttgggtatgctctggacattcca
tggtatgccagcttgccacgcgtggagacaagattttacgttgaacagtatggaggtgga
gatgacatatggattggcaagactttctacaggatgtaccttgttaacaatgatgtctat
tctgagcttgcaaagctggatttcaacaactgccaagaattacatcagcttgaatgggac
aggattcaggagtggtggacgcacagccatcttcaagagttcgggctcagcagagaaacc
ctcctcctggcttattttctcgcagcagccagtatatttgaaccagaaaggtcggtagag
agggtggcgtgggctaaagctgccgtcctggtagaggcagttgcatcttatttcaacaag
gaaacatgtattaagcagaggagagccttccttcttaaattcgggtacagtgcaagtgga
ggacgctacatgaagattaatggaagttctaatctgagcaagactggagaggagctcgcg
gggttattactcactaccttaaaccagctctcattggatgcacaggagctgcatggctgc
gacatacgtcagcttttacatcatacttgggaaatgtggttgacaaagaacttggcagaa
gaagatggatgccaaggagaagcggaggtcctggtggatgtgataaacctttgctctggc
cgttcaatcacggaagagctgttgaaccatcctctttataagcatctcttacacctcacc
aatggtgtctctcaccaacttagtccattttaccagcacaaggcacatattagaagctat
aatcctgaaaaaggaagtgatgttagttctaaagtagaaccggacatgcaagaacttgca
cagttggtgctccaaaactccactgaggacatagatcccgtgatcaagagaacatttcta
atggtagccaaaagtttctactacgctgcctactgtgatcctgcaactattgactctcat
attgctaaagtacttttcgagagagtagtttga
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