KEGG   Vitis riparia (riverbank grape): 117921577
Entry
117921577         CDS       T07274                                 
Name
(RefSeq) RING-box protein 1a-like isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03420  Nucleotide excision repair
vri04120  Ubiquitin mediated proteolysis
vri04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117921577
   04120 Ubiquitin mediated proteolysis
    117921577
  09124 Replication and repair
   03420 Nucleotide excision repair
    117921577
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vri04121]
    117921577
   03400 DNA repair and recombination proteins [BR:vri03400]
    117921577
Enzymes [BR:vri01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     117921577
Ubiquitin system [BR:vri04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   117921577
  Multi subunit type E3
   SCF complex
    Ring finger protein
     117921577
   Cul2 complex
     117921577
   Cul3 complex
     117921577
   Cul4 complex
     117921577
   Cul7 complex
     117921577
   Cul8 complex
     117921577
   Cul9 complex
     117921577
DNA repair and recombination proteins [BR:vri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      117921577
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      117921577
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 Ntox43 SCIFF
Other DBs
NCBI-GeneID: 117921577
NCBI-ProteinID: XP_034695386
LinkDB
Position
9:complement(775086..778402)
AA seq 122 aa
MDIDITVIPAGEGSGTAGPLFSVSPSSSSSKKIKRFETKKWNAVALWAWDMVVDTCAICR
NHIMEHCIECQANQGSAASNECTVAWGVCNHAFHFHCISRWLKTRHVCPLDNSEWDFQKY
GH
NT seq 369 nt   +upstreamnt  +downstreamnt
atggacatcgacataacagtaattcccgccggcgagggatcaggcaccgctggtccgttg
ttctccgtctctccttcgtcttcttcatccaagaaaatcaagcgttttgaaaccaagaag
tggaacgccgtcgccctctgggcttgggatatggttgtggatacctgcgctatttgcagg
aaccacatcatggaacattgcattgaatgccaagctaatcaaggtagtgcagctagcaac
gagtgtactgttgcttggggcgtatgcaaccatgccttccacttccactgcataagcagg
tggctcaaaacccgccatgtttgtccattggataacagtgagtgggattttcagaaatac
ggtcactag

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