Vitis riparia (riverbank grape): 117922907
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Entry
117922907 CDS
T07274
Name
(RefSeq) DNA repair protein RAD16-like isoform X1
KO
K15083
DNA repair protein RAD16
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vri03400
]
117922907
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
117922907
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-RING_2
Prok-RING_4
zf-CW
Prok-RING_1
MBTPS1_4th
Motif
Other DBs
NCBI-GeneID:
117922907
NCBI-ProteinID:
XP_034697008
LinkDB
All DBs
Position
10:22849724..22869553
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AA seq
820 aa
AA seq
DB search
MVRRSNRIAALPPKSFAALESSEEEEEEDSAGEEEREKDDEGRLQDVFDDDKEDASEHRP
KRGRKKQQSKPKLQWKVLEEDYETFLDFFEIKNHLIDFEDEVILETTEAPPLFLVPLLSH
QKEWLTWALEQEESPFRGGLLADEMGMGKTIQVIALVLAKKPIHRIDARPSKALPSSSSQ
TAELPETRCTLIICPPVCLSHWEKEIGRCTPQGSTKVLVYHGDDRNKVVHDLSSYDFVLT
TYQTMFTKYKTSYMARCELCGKWRFPEDLASHNTFYCKGRRFGTDERESEEKLKSSKMEA
RCASSEDNTSDSDGSRGKSSCTKKKKNPKQKKKADTSSFKSSPSITTEFSLHSIKWQRII
LDEAHSIRNKNCYTTRAIFSLKSSYKWALSGTPVQNNFQDLYSLIRFLQIFPYAYYFCRS
CDWKSVSIMPEHRCAHNYCFSWWKKYVGKPMRQEGDAKRRAKTLVTQKILKSIMLRRTKE
SRNELCLPTKIVRVRRCALDIREEEYYRTLYEKYRSYFNRYVTAEHSWINCTCIIRLLTQ
LQKALNHPYLVIYSKYMIGLATNDQVCGICHEALEDKVVASCKHVFCKTCLQSLAPAFGV
ALCPACSAPFSVKSAMKKNDSTLKNYAGSGTTFNDFKSSSILNRIALNEFQTSTKIEALR
EEIRFMVETDGSAKALVFSQFVSFLDLIDYSLQKSQINCVKLVGDVAARNALVSRFFNDS
DCRILLTTSEAGGLSLNLSVASYVFLMEPFFSSAVELQACDGVYRIGQHKAVRIVKFVTE
NTIEERILELQAKKNQNSQSSGLPNLEEELTVKDFNIFFM
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcaggtctaatcgcatcgctgcccttccacctaagagctttgcagccctagaa
agttctgaagaagaggaggaggaggacagcgctggcgaggaagaaagggagaaagatgat
gaagggagacttcaagatgtttttgatgatgataaggaagatgcatcagagcatagacca
aagagagggcgaaaaaagcaacagagcaaaccgaaactacagtggaaagttttggaagaa
gattatgagacatttctagatttttttgaaataaaaaaccatcttattgatttcgaagat
gaagtgattttggaaactactgaggcacccccactttttcttgtacctcttttgagccac
caaaaggaatggctgacttgggctttagagcaggaggagtcaccttttagaggagggctt
cttgcagatgagatgggaatggggaaaacaatccaagtcattgcactggttcttgcaaaa
aagccaatccatagaattgacgctagaccatctaaagcattaccttcatccagttcacag
acagcagaattgccagaaactagatgcacactcattatttgtcctccagtttgtctgtcg
cattgggagaaggagattggtcgttgtacacctcaagggagcaccaaagtgttggtctat
cacggggatgacagaaacaaggtggttcatgacttatcgagttatgattttgttctgaca
acttatcagactatgtttacaaaatacaagacctcttacatggcaaggtgtgaattgtgt
gggaagtggaggtttcccgaagatcttgcttcacacaacacattttattgtaaaggaagg
agatttggaactgatgagagagagtctgaggagaaactgaaatcttccaaaatggaagca
agatgtgcaagttcagaagataatacaagtgattctgatggtagtagagggaagagttct
tgcactaaaaaaaagaagaatcctaagcagaaaaagaaggcagacacttcgtctttcaag
tcaagtccatcaatcactacggaattctctttgcactcaattaagtggcaacggattatt
ctggatgaggctcactccataagaaacaaaaattgttatactacaagagcaattttttct
ttgaagtcttcatacaaatgggctttaagcggcactccagttcagaataatttccaagat
ctttactcactgatccgcttcctgcaaatttttccttatgcatactacttttgtcgttct
tgtgactggaaatcagttagtatcatgcccgaacatcgttgtgctcataattattgcttt
tcctggtggaaaaagtatgttggtaaaccaatgagacaggaaggtgatgcaaaaagaaga
gccaagactttggtaacccaaaagattctgaaaagtataatgttaaggcgcactaaagaa
agtagaaacgaactttgccttccaactaaaattgttagagtgagacgatgtgcattagat
attagagaagaagagtattataggacactatatgaaaaatatcgatcatattttaacaga
tatgttacggctgagcactcatggataaattgcacttgcataattagacttttgacacag
ttgcagaaggcactcaatcacccatatcttgtgatttattctaaatatatgattggtttg
gctactaatgatcaagtctgtggcatttgtcatgaggccttggaagataaagtggttgca
tcttgcaagcatgtcttttgtaagacttgcctgcagtctcttgctccagcctttggagta
gctttatgtcctgcatgctcagcaccattttctgttaaatcagcaatgaagaagaatgat
tccacattgaagaactatgctggttctggaacaacctttaatgactttaaatcctcaagt
atcttaaacagaattgctctcaatgagtttcagacaagcacaaaaattgaagctttgagg
gaagaaatcagattcatggtagaaacagatggttctgcaaaagctcttgtttttagccag
ttcgtttctttcttggatttaattgattactccttgcagaagtctcaaataaattgtgtt
aagctggtgggggatgttgctgcaagaaatgcattggtatcaaggttctttaatgactca
gattgcagaatcttactcactacttcagaagctggaggtctttccctgaatctctctgtt
gcatcttatgttttcttgatggaacccttctttagctctgctgtggagttgcaggcttgt
gatggagtttaccgaatcggtcagcacaaggcagtaagaattgtgaagtttgtaactgag
aacacaatagaagagaggattctggagctgcaagcaaagaaaaatcaaaattcacagagt
tctggtttaccaaatcttgaggaagaactaacagttaaggacttcaacatcttcttcatg
taa
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