Vitis riparia (riverbank grape): 117925618
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Entry
117925618 CDS
T07274
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic isoform X1
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00906
Carotenoid biosynthesis
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
117925618
Enzymes [BR:
vri01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
117925618
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
FAD_binding_2
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
117925618
NCBI-ProteinID:
XP_034700573
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Position
11:18279389..18286469
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AA seq
529 aa
AA seq
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MECLGAPNFAAMAVSTSAPWRSRRRRMRPENACFNHRDSCYLPSVRVRASAGSESCVVVK
EGFADKEDYIKAGGSELLFVQMQQNKAMDEQSKLADKLPQISIEDGTLDLVVIGCGPAGL
ALAAESAKLGLSVGLIGPDLPFTNNYGVWEDEFKDLGLGRCIERVWRDTIVYLDDGDPIL
IGRAYGRVNRHLLHEELLKRCVESGVSYLSSKVERITEASNGHSLVVCERDIVIPCRLAT
VASGAASGKLLQYEVGGPRVSVQTAYGVEVEVENNPYDPSLMVFMDYRDHIKQKVQCLEV
QYPTFLYVMPMSPTRVFFEETCLASKDAMPFDLLKKKLMSRLETMGIRIIRTYEEEWSYI
PVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIANILKRSHSKDIFTR
GRSTGNISMKAWNTLWPQERKRQRSFFLFGLALILELDIEGIRAFFHTFFRLPNWMWQGF
LGSTLSSADLILFAFYMFILAPNQMRMCLIKHLLSDPTGATMLRTYLTV
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtctcggagctccgaactttgcggcaatggcggtctctaccagtgccccgtgg
aggtcgagaaggaggagaatgaggcctgagaacgcttgttttaatcatcgggacagttgt
tatctgccgtccgtgcgagtgagggctagtgctgggagcgagagttgtgtggttgttaag
gaaggttttgcggataaggaggactacatcaaggccggtggatcggagcttctttttgtg
caaatgcagcagaacaaggccatggatgaacagtcaaagctagccgacaagttaccgcag
atatcaattgaagatggtacactggatttagtggtgattggttgtggcccagctggtctc
gctttggctgcggaatcagcaaagttaggattgagtgttgggcttattggtccagatctt
cctttcacaaataattatggcgtatgggaggatgaatttaaagatcttggccttgggagg
tgcattgagcgtgtttggcgggataccattgtatatcttgatgatggtgatccaattttg
attggtcgtgcttatggacgagtcaatcgacatttgctccatgaggaactgttgaaaagg
tgtgtcgagtcaggtgtttcatatcttagctcaaaagtagaaaggattacagaagcttcc
aatggtcatagtcttgtagtttgtgaacgtgatattgttatcccctgcaggcttgctact
gttgcatctggggctgcttcagggaaactcttacagtatgaggtgggtggtcccagggtt
tctgtccaaacagcttatggggtggaggttgaggtggaaaacaatccatatgatccaagt
ctgatggttttcatggactacagagaccacattaaacaaaaagttcaatgtttagaagtg
caatatccaacatttctctatgtcatgcccatgtcaccaacaagagtcttctttgaggaa
acttgtttggcttcaaaagatgctatgccttttgatctactaaagaaaaagctcatgtca
aggctagagacaatgggaatacgaattataagaacttatgaagaggaatggtcttatatc
cctgttggtggatccttaccaaatacagagcaaaaaaaccttgcatttggtgctgctgct
agcatggtacatccagccacaggctactcagttgtaagatcattgtcagaggctccaaaa
tatgcttctgtaattgcaaatattttgaagcggagtcattctaaggacatttttactcgt
ggaagaagtactggaaatatctcaatgaaagcttggaataccctttggccacaagaaagg
aaacgacagagatcattctttctctttggtttagcactcattctcgagctggatattgag
ggcattagggcattctttcatactttcttccgcctacccaattggatgtggcagggattt
cttggctccactctctcctcagctgatctcatcttatttgccttctatatgtttatatta
gcaccaaaccaaatgagaatgtgccttatcaaacatctactatctgaccctactggagca
accatgctaagaacatatcttactgtatag
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