KEGG   Vitis riparia (riverbank grape): 117926638
Entry
117926638         CDS       T07274                                 
Name
(RefSeq) switch 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vri03400]
    117926638
DNA repair and recombination proteins [BR:vri03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    117926638
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 ERCC3_RAD25_C SWI2_SNF2
Other DBs
NCBI-GeneID: 117926638
NCBI-ProteinID: XP_034701707
LinkDB
Position
12:19150138..19156739
AA seq 874 aa
MSLNTLKETLRQCTNPSSSTLISYTNSSISREIDPINPRKPPKSSLSKQLQRLQDPFSLP
QIQPRNQQKQSLDHEEEEEVEAQEGFEKPQLGFLQFDFTGPFVPLVLSSDDEVPVIQIPA
SINHRLLEHQREGVKFLYNLYKHNHGGVLGDDMGLGKTIQTIAFLAAMFGKDGECGDSTI
LKGNQMGKKGPVLIVCPTSVIHNWESEFSKWATFSVSVYHGANRDLIHDKLEAHGVEILI
TSFDTYRIHGSILSEVPWEIVVIDEAHRLKNEKSKLYTACLEIKTRKRIGLTGTIMQNKI
MELFNLFDWVAPGCLGTREHFREFYDEPLKHGQRSTAPERFVRVADERKQHLVAVLHKYL
LRRTKEETIGHLMMGKEDNVVFCAMSELQKRVYTRMLQLPDIQCLINKDLPCSCGSPLTQ
VECCKRTVPNGIIWSYLHRDNPDGCDSCPFCIVLPCLVKLLQISNHLELIKPNPRDDPDK
QRKDAEFASAVFGTDIDLVGGNTQSESFMGLSDVKHCGKMRALEKLMLSWVSHGDKILLF
SYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLISTRAGGLGL
NLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVVFRLLAAGSLEELVYSRQVYKQQ
LSNIAISGKMEKRYFEGVQDCKEFQGELFGICNLFRDLSDKLFTSEIIELHENQRQDHGH
NRSTKMDLSELGSYFVQSKEAIETVSSAPESRKPKYFKSDTTLEDLGIVYAHRNEDIVNF
GPTIQGKEEASVAQHDGQRQLHIPVAEKRRPNGVSRKENASSAKDWKKREFSLLAQFMGM
KEVGFSKWLLAAAPSEREKVLQDYKKRKKKIPNG
NT seq 2625 nt   +upstreamnt  +downstreamnt
atgtcattgaacacattgaaggagaccctcaggcagtgcacaaacccatcatcctccacg
ctcatctcttacacaaactcctcaatttcacgtgaaatcgatcccataaaccctagaaaa
ccgcccaaatcatccctctctaagcagcttcaacgtctccaagaccccttctctttaccc
caaattcaaccgcggaaccaacaaaaacagtcactagaccatgaagaagaagaagaagta
gaagcacaagaagggtttgagaaaccccagttgggttttcttcaatttgacttcacgggt
ccttttgtaccgttggtcttgtcttcggacgatgaagttccggtgatacagattccagca
tctatcaaccataggcttcttgaacatcaaagagaaggagtgaagtttttgtacaatttg
tacaagcacaaccatggaggtgttcttggagatgacatgggactggggaagaccattcaa
acaattgcattcttggctgctatgtttggaaaagatggagaatgtggtgactccacaata
cttaagggaaatcagatgggaaagaagggtcccgtgttaattgtttgcccaacttctgtt
attcacaattgggaaagcgaattctctaagtgggcaacttttagtgtctctgtttaccat
ggtgcaaatcgtgatctcattcacgacaaactagaagcacatggagtggagatacttatt
accagttttgacacataccgaattcatggcagcatcttgtcagaggttccgtgggagata
gtggtcattgatgaggcccatcgactgaaaaatgaaaagtcaaaactttacactgcttgt
ttagaaattaaaactcgtaaacgaattggtctgacaggaaccataatgcagaacaaaatt
atggaattgttcaatctctttgactgggtggcaccaggttgtttgggaacacgggaacat
ttccgggagttttatgatgaacccctcaagcatggccagaggtcaactgcccctgaaaga
tttgtccgggttgctgatgagcgaaaacaacacttagtggcagttctacataaatatctt
ctaagaaggacaaaagaagagaccattggccatcttatgatgggaaaggaagataatgtt
gtattttgtgcgatgagtgagttgcaaaaacgggtttatacaaggatgttacagttacca
gatatccagtgcctcataaataaggatctcccatgcagctgtggtagccctcttactcaa
gttgaatgttgtaaaaggactgtaccaaatggaatcatctggtcataccttcacagggac
aatcccgatggttgtgattcatgtcccttttgcattgttcttccttgtcttgtcaagctc
ctgcagataagcaatcacttggagctgattaaacctaaccccagggatgaccctgataaa
caaagaaaagatgctgaatttgcatctgctgtgtttggtactgacattgatttggtgggg
ggaaacactcagagtgagagttttatgggcctaagtgatgttaaacactgtggcaagatg
cgagcattggaaaagttaatgttgtcttgggtttcacatggtgacaaaattcttctgttc
agttactctgtcaggatgttggacattctggagaagtttctcatacgcaaaggttattgc
ttctcaagacttgatggttccactccaaccaacttgcgtcaatctcttgttgatgatttc
aactcaagtccaagcaagcaagtgtttcttatatcaacccgagctggtgggcttggactg
aatcttgtcagtgcaaaccgcgtagtaatatttgatccaaactggaatcctgctcaagat
ttacaggcccaggacaggtcatttcgttatgggcaaaagcgtcatgttgtggtgttccgc
cttcttgcagctggttctcttgaggaacttgtttattcccgtcaagtgtacaaacagcag
ctgtcaaatattgcaatttctggaaaaatggaaaaacgatattttgagggtgtccaggac
tgcaaggaatttcaaggcgaactttttgggatctgcaacttatttcgtgatctatctgat
aagctttttaccagtgagatcatagagttacatgaaaatcaaagacaagatcatgggcac
aatcgtagtacaaaaatggatttaagtgaactcggaagctacttcgtgcaatcaaaagaa
gctattgaaacagtttcctcagcgcctgaaagcagaaagcctaaatattttaagagtgat
acaacgctcgaagacttgggtattgtgtatgcccaccgaaacgaagatatcgtcaatttt
ggtcccacaattcaagggaaggaagaagcgtctgttgcccagcatgatggccagaggcaa
ttgcatatccctgttgcagagaaaagaagaccaaatggagtatctagaaaagagaatgct
tcttcagccaaggactggaaaaagagagaatttagcctcctggctcagttcatgggcatg
aaagaggttggattcagcaagtggctgctagcggcagctccttcagagcgtgagaaagtg
ctccaagattacaagaagagaaagaagaaaatacctaatggatga

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