Vitis riparia (riverbank grape): 117927141
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Entry
117927141 CDS
T07274
Name
(RefSeq) transcription factor PIF4-like
KO
K16189
phytochrome-interacting factor
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
117927141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117927141
Transcription factors [BR:
vri03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
117927141
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
117927141
NCBI-ProteinID:
XP_034702447
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Position
12:complement(21712885..21716540)
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AA seq
535 aa
AA seq
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MNHHLLPDWNIEGDVPVTNQKKPMGQEHELVELLWRNGQVVLHSQTQRKSGLAPNESKQV
QKHDQTMLRNGGSCGNWSNLIQDEESISWIQYPLDDSLDKEFCSNLFMELPPNDPVQPEK
PVRHSEQEKSVPNVVPSSQQPIFKHLGSPEFPGNPMPPPKFQVPGSVQQNCSSGGFGKIV
NFPNFSFPGRTNLGSSKAQLGGKGSGNMAQGGDAKEGSVVTVGLSHCGSNQVVNEADLSR
FSSSGVGTGCLSSGHVKDNVPRIVSQGDRRQTETLEPTVTSSSGGGSGSSFGRTYKQSTD
TNSHKRKGREAEESECQSEAAEHESAARNKASQRSGSTRRSRAAEVHNLSERRRRDRINE
KMKALQELIPHSNKSDKASMLDEAIEYLKSLQLQLQLMWMGGGVAPMMFPGVQHYMARMG
MGMCPPPLPSIHNPMHLPRVQLVDQSTSAVPPPNQPPICQTPVLNPVNYQNQMQNPNFSE
QFAHYLGFHPMQTPSQPMNVFSFGSQSHPMASPATTGGTSTAAAAVDGAPGSKLG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaccaccttcttccagattggaatattgaaggcgatgtccctgtaaccaatcag
aagaaacccatggggcaagagcatgagcttgtagagctcttatggcgaaatgggcaggtg
gtattgcacagccaaacacagagaaaatccggtcttgctccaaatgagtctaaacaagtt
cagaaacatgatcaaaccatgctaaggaatggtgggtcatgtgggaattggagtaatttg
attcaggatgaggagtcaatctcatggatccaatacccactggacgattcccttgacaag
gagttctgttctaatttgttcatggaattgccgcccaatgatccagttcagcctgaaaag
cctgttagacactctgaacaagaaaagtctgtccccaatgtcgtccccagctcacaacaa
cctatttttaagcatttgggtagccctgaattcccaggaaacccaatgccgccgcctaag
tttcaggttcctggttcagtccagcagaattgcagctcaggaggatttggaaagattgtt
aactttcctaacttttcattcccagggagaaccaatttaggatcttccaaggcacaactg
gggggaaagggatcaggaaatatggcacaaggaggagatgctaaagagggttcagtcgtg
acagttgggctgagccactgcggcagcaatcaagttgtgaatgaggctgacttgagccga
ttttcaagcagtggcgttggcaccggttgtttatcttcagggcatgtcaaggacaatgtt
ccgaggatagtttctcagggggacagaaggcaaacagagacgcttgaacctactgttact
tcatcttccggtggtgggtcgggcagtagttttgggagaacatacaagcagtcgaccgac
accaatagccacaaaagaaagggcagagaagcagaggaatctgagtgccaaagcgaggct
gctgagcatgaatcagctgcaagaaacaaggcatcacaaagatccgggtcaactaggagg
agccgtgctgctgaagtccataatctctcagagaggagacggagagatcgaatcaatgag
aaaatgaaggcattacaggagcttatacctcacagcaacaagtcagataaagcatcgatg
ctagatgaggcaattgagtacttgaagtccctccagttacaacttcagttgatgtggatg
ggaggtggtgtcgcgcctatgatgtttccaggagtccagcactatatggccagaatggga
atgggaatgtgtccacctccactgccttctattcacaacccaatgcatttaccaagggtt
caactagttgatcagtccacatctgcagttccaccgccaaaccagcctccaatttgccaa
accccagtcttgaatccggttaattatcaaaatcagatgcaaaatcccaacttttcggag
cagtttgcacattacttgggcttccaccctatgcaaactccctctcagcccatgaatgtg
ttcagctttggatcccagagtcaccccatggcatcgcctgccaccactggtggcacctcc
actgcagctgctgcagttgatggtgctccaggcagcaagttgggttaa
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