Vitis riparia (riverbank grape): 117928561
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Entry
117928561 CDS
T07274
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117928561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117928561
03041 Spliceosome [BR:
vri03041
]
117928561
03032 DNA replication proteins [BR:
vri03032
]
117928561
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
117928561
Spliceosome [BR:
vri03041
]
Complex A
U1 snRNP components
Sm proteins
117928561
U2 snRNP components
117928561
Complex B
U1 snRNP components
117928561
U4/U6.U5 tri-snRNP components
117928561
Complex C
U2 snRNP components
117928561
DNA replication proteins [BR:
vri03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
117928561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117928561
NCBI-ProteinID:
XP_034704358
LinkDB
All DBs
Position
13:13459417..13477551
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AA seq
276 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNE
EREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVGAAAMAGPGIGRAAGRGIPTAPL
IQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIRPPGQMPGYPGQA
PPQIARGPPPPVPAQFAARPGGAPQPPFQVPPPQYGGRPMVPPPQMMRGPPPPPRPGMQA
PPPPRPGMPPPPGSGVPVFGPPRPGMPPPPNPPQQQ
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtctaaaagttcaaagatgcttcaatacatcaactacagaatgcgagtgacc
atccaggatggccgtcaactcgtcggaaagttcatggcattcgaccgccacatgaacctc
gtcctgggcgactgcgaagagttcagaaaattgcctccagctaagggtaaaaagaacgaa
gaacgcgaagaacgacgaaccctaggccttgttctcctcagaggagaagaggtcatttcc
atgaccgtagagggtccgccccctcccgaagagtcccgcgccaaagccgtcggcgccgct
gccatggccggtcctggcatcggccgtgctgccggtcgtggaatccccaccgctcccctc
attcaggctcagcctggcctcgctggacccgttcgcggagttggtggccctgcgccaggc
atgatgcagcctcagatctcgcgcccgccggtgccccagctatctgcaccgcccatgact
tacccggccgcgccggtaattcggcctcccggacagatgcctggataccccgggcaggca
cctccccagattgcacgtggcccaccgcctcccgtgcctgctcagttcgctgctaggccc
ggaggagcaccgcagcctcccttccaggttcccccaccgcagtatgggggccggccaatg
gtgccgccccctcagatgatgagaggtccgccacctccacctcggcctggaatgcaggcc
ccaccaccgcctcgtcctggaatgccacctccaccaggcagtggtgtccctgtttttgga
ccacctcgtcccggcatgccacctccgccaaatcctccgcaacagcagtag
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