Vitis riparia (riverbank grape): 117929742
Help
Entry
117929742 CDS
T07274
Name
(RefSeq) 4-coumarate--CoA ligase-like 9
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00130
Ubiquinone and other terpenoid-quinone biosynthesis
vri00940
Phenylpropanoid biosynthesis
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Module
vri_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
vri_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
117929742
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
117929742
Enzymes [BR:
vri01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
117929742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
117929742
NCBI-ProteinID:
XP_034706030
LinkDB
All DBs
Position
14:4059310..4062466
Genome browser
AA seq
543 aa
AA seq
DB search
MEKSNLRIDPKSGFCSATKTFQSLKPTVELPPQHLLLSADAYAFSLRSGLGCPDSAALIN
STTGHRLLYSEFALRSKTLAAYLQTVIGLSKGDTAFVLSSNLIQVPILYFSLLSLGVIIS
PANPINTQSEISRQIELCKPVIAFSISTAAHKLPSLHHRTVIIDSLEFDSMMTGPIRELV
RVEVSQSDLAAIMYSSGTTGRVKGVMLTHRNLIAMTASLHEGRSVRSSPDVLLYTVPFFH
MIGFFYCVKSVALNETVVVMERFDLRRMLTLVEKFKVTHMAVVPPVLVAMAKGDATDNND
LTSLESVSCGGAPLGKDLCQAFTAKFPNVAIRQGYGLTESSGAVSRLLDPEECRHWGSVG
RLTGVFEAKIVDPDTGLALPPCKQGELWVRGPAVMKGYVGDRKATRETLVSDGWLRTGDL
CYIDGEGFLYVVDRLKELIKYKGYQVPPAELEHLLQSHPEIVDAAVIPYPDEEAGEVPMA
YVVRRPQSSLNEAQVMDFIAKQVAAYKKIRRVSFVSSIPKSPAGKILRKELRKLADPGSL
SKL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatcgaaccttcgcatcgatcctaagagcggtttctgctcggctaccaagacc
ttccaaagcctcaaacccaccgttgagctcccacctcaacatctccttctctccgccgat
gcatatgctttttctctccgatccggtttgggctgccctgactcggccgctctcatcaac
tcaaccaccggtcaccgcctcttatattctgaattcgccctccgctccaagaccttggcc
gcttatctccaaacagtaatcgggctctccaaaggcgatactgcgtttgtactctcttcc
aatctcattcaggttccgattctatacttctctctgctctcactcggcgtaatcatctct
cctgccaatccaatcaacacccaatccgaaatttcccgtcaaatagagctgtgcaagccc
gtgattgccttttccatctcaactgctgctcacaagcttcccagcctccatcacagaacc
gttatcatcgactcgttagagttcgactcaatgatgacgggtccaatccgtgaactcgtc
cgcgtggaggtgagtcaatcagatctggcggcgataatgtattcgtcggggacgaccggg
agagtcaagggagtgatgttgactcaccggaatctgattgcgatgaccgcgagcctccac
gaggggcgatctgtgaggagttcgccggatgtactgttatacacagtacccttttttcac
atgattggctttttctactgtgtaaagtctgtggccttgaacgagacagtggtggtgatg
gaaaggtttgacttaagaagaatgctgacgttggtggagaaatttaaggtgactcacatg
gcggtggttccgccggtgttggtggcgatggccaaaggagatgcaacggacaacaacgac
ttaacgtcgttggagagcgtgtcgtgcggcggagccccgcttgggaaggacttgtgccaa
gcattcactgccaagttccccaatgttgcgatacggcagggttatgggctgactgaatca
tcgggggcagtttcccgactactggatcctgaagaatgtcgtcattggggctcagtagga
aggcttacaggggtttttgaagcaaaaatcgtggacccagacacaggccttgcgctgcct
ccctgcaaacaaggagaactttgggttagaggacctgcagttatgaaaggctatgttggg
gaccgaaaggcaactcgggaaactttggtttcagatgggtggttgaggacaggtgatctt
tgttacattgatggggaaggtttcctttatgttgtagatagactcaaggaacttatcaaa
tacaaaggataccaagttccccctgcggagctggaacacttgctccaatcccatcctgag
attgttgatgctgctgtgataccataccctgatgaagaagctggtgaagtccccatggcc
tatgtagtaagacggccccagagcagcctgaatgaagcacaagtgatggattttattgca
aaacaggttgcagcatacaagaaaataagacgcgtatcgtttgtgagttccatacccaag
agtccggctgggaaaatactgaggaaggagttgcggaagctggctgaccctgggtctctg
tctaaattgtaa
DBGET
integrated database retrieval system