Vitis riparia (riverbank grape): 117930702
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Entry
117930702 CDS
T07274
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04075
Plant hormone signal transduction
vri04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
117930702
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
117930702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117930702
Transcription factors [BR:
vri03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
117930702
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Tex55
Motif
Other DBs
NCBI-GeneID:
117930702
NCBI-ProteinID:
XP_034707239
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Position
14:29551578..29557041
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AA seq
709 aa
AA seq
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MPFSELYRMAKGKPESVQQKTNDLSFGPENDFVELVWEGGQIMMQGQSSRARKSPLSNSF
PSHTPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGLSQDDDMVPWLNYPIDE
SLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSNTISAHNGVSLEQGNA
SKASAAGVEPSRPRSSQLYPPSSQQCQTLFPSMRSKVSDPISNNTSNAMHHTVSGNSIRF
PASTSGFSSTKTQKQDPGQTRNNSGLMNFSHFSRPAALVKANLQNIGAIAGPSSSSKDRI
GSKDKQPAASSRNPAESRHVDSSCGLQKDVDSHSEPVMVPASVDLKPVVAKTMEEPLPAE
QSPVICQEGACKNEKSSNQVLGARTAKGIPDGEKSIEPAVACSSVCSGNSVERASNDPKH
NLKRKCRDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINE
KMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHA
AHMGHFPPMGVGMGMGMGMGYGMGMLDMNGGSPSCPFIQAPPMQGTHFPGRPISVPPNLH
GMVGSNLQVFGLPGQGIPLSMPHAPLIPMSGSPLMKSSMALNDSGAAGSMEVPDSAPASS
SKDLIQNVNSQVMQNNDANSSMASSQCQEQSALVQKNDQAPDVSHGEGV
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcctttctctgagctttatcgaatggctaaggggaaacccgaatcagtgcaacagaaa
acaaatgatctctcttttggacctgaaaacgattttgttgagctagtatgggaaggtggt
cagattatgatgcaaggtcagtccagtagagctagaaagagtcccttatctaacagtttt
ccatctcacacccctaagcctcgtgataaagatactggacatggcaccaattcaaagatg
ggaaagttcgggtcaatggattttatcttgaatgattttccattgtccgtgccatctgct
gaaatggggttgagtcaagacgatgatatggtaccttggttgaattatcccatcgatgaa
tctttacaacatgattattgttcagatttcttgcaagaattatccggtgtcactgtaaac
gagttatccactcattgcaattttgcatccggggagaagaggaatagtaataatcagaca
attaaagattccaataccatttctgcacataatggtgtgagtctagaacaagggaatgca
tctaaagcttctgcagcaggtgttgagcctagtaggccgagaagtagccagttatatccc
ccatcatcccagcagtgtcaaacgctatttccatctatgagatcaaaagtttcagatccc
attagtaataacacaagcaatgctatgcaccatacagtttctggcaactccattcggttt
ccagcttccacaagtggtttttcgagcacaaagacccagaagcaagatccaggacagact
agaaataactctgggttgatgaacttctcccatttctcacgacctgcggctcttgtcaaa
gctaatcttcagaacattggtgctattgctggtcctagttcatcaagcaaagataggatt
ggaagtaaggataagcagcctgctgccagcagtagaaatcctgctgaatccagacatgtt
gattccagttgtggtttacagaaggatgtggattctcatagtgaacctgttatggtgcct
gcaagtgttgatttaaaaccggtggtggctaaaactatggaggaaccacttcctgctgag
caatccccagtcatttgccaagaaggtgcctgcaagaatgaaaaatcctccaaccaagtt
cttggtgcaagaactgctaaagggattccagatggtgaaaagagtatagagccagcagtt
gcttgttcttctgtttgctcaggcaatagcgtggagagagcttcaaatgacccaaaacat
aatttaaagagaaaatgccgtgacacagaggagtctgaatgcccgagtgaagatgttgaa
gaagaatcagtgggtgtgagaaaatcagctcctgctaagggaggtacaggttctaagaga
agtcgagcagcagaagtgcataatttatccgaaaggaggagaagggacaggatcaacgag
aagatgcgtgcattacaagaactcatacccaactgcaataaggtggacaaagcatcaatg
cttgatgaagccattgagtacttgaaaacccttcaacttcaagtacagattatgtcaatg
ggaaccggattgtgcatgcctcccatgatgttaccgactggaatgcagcacatacatgca
gctcatatgggtcactttccacccatgggtgttggaatgggcatgggaatggggatgggt
tatgggatgggcatgcttgatatgaatggtggttctcccagttgcccctttattcaggca
cctccaatgcaaggaacacatttccctggtcgacctatttcggtccctcctaatttgcat
gggatggtgggatccaatcttcaagtatttgggcttcctggtcaaggaattcccttgtcg
atgcctcatgcaccattaattcctatgtctgggagtccccttatgaagtcttccatggca
ctgaatgactctggggcagcaggctctatggaagttcctgattctgctccagcctcaagt
tcaaaagatctgatacaaaatgtgaactcacaagtgatgcaaaacaatgatgccaatagc
tcaatggcatcaagtcagtgtcaggagcagtctgctttggtgcaaaaaaatgatcaagcc
ccagatgttagtcacggtgaaggtgtttga
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