Vitis riparia (riverbank grape): 117931261
Help
Entry
117931261 CDS
T07274
Name
(RefSeq) ABC transporter I family member 20-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117931261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117931261
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117931261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_15
Arf
AAA_23
AAA
AAA_30
ORC-CDC6-like
nSTAND3
AAA_7
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
117931261
NCBI-ProteinID:
XP_034708090
LinkDB
All DBs
Position
14:29154204..29157247
Genome browser
AA seq
329 aa
AA seq
DB search
MAVKDISKPTVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTT
ILKILGGKHMVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGFEVPIQMDVS
AEKMIFGVSGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEI
TVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVYVAHGKLQLAMPMEK
VREMSNLSLMRTVESWLRKERDEGRKRRKERKAVGLPEFESQVEGSRVAGDPARAAVRAL
NNGWAAGRLHSTIAGEENFFLSSNSVLRQ
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaaggacatctcgaagccaacggtggagatcaacaatctgagattcacctac
ccaggaatcgacggccaacctcctcccggatctacgcctctgatcgaccacttctctctc
actctcaactccggcgaccgctgcctcctcgtcggatccaatggcgcagggaaaactaca
attctgaaaatcttgggtgggaagcacatggtagaacctcacatggttcgagtacttgga
agatcggcttttcatgacactgccttgacatcttctggtgacctctgctatcttggagga
gagtggaggcgagacgttgcctttgctgggtttgaggttccgattcaaatggatgtttca
gctgagaaaatgatatttggagtatcaggtattgatcctcaaagaagagctgaactaatc
aaggttttagatattgatctatcatggagacttcacaaggtgtctgatggtcagagaaga
cgggtgcaaatctgtatgggtctcctcaagccattcaaagttcttcttctagacgagata
acagttgatcttgatgtactggccagggccgaccttctgaagttcctcagaaaggaatgt
gaagagcgaggtgctacaatcatctatgcgacgcatatatttgatggtctggagaattgg
ccatcccatcttgtgtatgtggctcatgggaaattacaattagcaatgccaatggaaaag
gtcagggagatgagcaatttgtcactaatgagaacagtggagagttggttaaggaaggaa
agagatgaggggaggaaaagaaggaaagaacgaaaggcagttggccttccagaatttgaa
agccaagttgagggcagccgagtggctggggaccctgctcgtgctgctgttcgtgcattg
aacaacggatgggctgctggaagactgcactccaccattgctggtgaagagaattttttc
ttaagttcaaacagtgtcttgagacaataa
DBGET
integrated database retrieval system
