Veillonella rodentium: 44547418_01172
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Entry
44547418_01172 CDS
T05216
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vrm
Veillonella rodentium
Pathway
vrm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
44547418_01172 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vrm03400
]
44547418_01172 (nth)
Enzymes [BR:
vrm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
44547418_01172 (nth)
DNA repair and recombination proteins [BR:
vrm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
44547418_01172 (nth)
Prokaryotic type
44547418_01172 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
SNV68229
UniProt:
A0A239ZAN2
LinkDB
All DBs
Position
1:complement(1253897..1254532)
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AA seq
211 aa
AA seq
DB search
MRVTKAIKAEQLKLLEEHYFDAKPALTYTNEFELLVAVVLSAQCTDERVNIVTKRLFPEL
NHPAKMLEIGVAKLEALIKDCGLYKSKAKNLIATCHILVEQYHGEVPREFDQLVQLPGVG
RKTANVVVSVLFGTPAIAVDTHVFRVSNRLKLGIAKTPEEMELKLQKAIPKEKWAAAHHW
LIYHGRRVCKARKPLCETCFLQHLCPSAGKV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttacaaaagcaattaaggcggagcaattaaaattacttgaagaacattatttt
gatgcaaaacctgcccttacatatacaaatgaatttgaattactggtggctgtggtatta
tccgcacagtgtacggatgaacgggttaatatcgtgacgaaacgattgtttcctgagtta
aatcatcctgcaaagatgctggaaatcggagtggccaagttggaggcattgattaaggat
tgcggcctgtataagtccaaggctaaaaacttgattgccacgtgccatatactggtagaa
caatatcatggagaggtaccgcgtgaatttgatcaacttgtacagttgccgggggtcgga
cgcaagaccgccaatgtggtagtttccgtcttgttcggtacgccggctatcgctgtggat
acacacgtgttccgtgtaagtaatcgtttgaaattaggtattgccaagacgccggaagag
atggaattgaaattgcagaaggctattccaaaggagaaatgggcggcggctcaccattgg
ctgatttatcatgggcgccgtgtctgcaaagcccgtaagccgttatgtgaaacatgtttc
ttacaacatctttgcccatcagcaggaaaggtttaa
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