Vibrio ruber: RND59_11980
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Entry
RND59_11980 CDS
T09542
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
vru
Vibrio ruber
Pathway
vru01501
beta-Lactam resistance
vru01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RND59_11980
01503 Cationic antimicrobial peptide (CAMP) resistance
RND59_11980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vru02000
]
RND59_11980
01504 Antimicrobial resistance genes [BR:
vru01504
]
RND59_11980
Transporters [BR:
vru02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RND59_11980
Antimicrobial resistance genes [BR:
vru01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RND59_11980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WNJ94847
LinkDB
All DBs
Position
1:2623801..2626956
Genome browser
AA seq
1051 aa
AA seq
DB search
MVRFFIDRPIFAWVIAIVIMLAGVLSIKTLPIEQYPQIAPPAVSISGVYVGASAKTVENS
VTQVIEQNMNGIDNLLYMSSNSDSSGSFSISLTFATGTDPDIAQVQVQNKLSAVESSLPE
SVVTRGITVAKSTSSFLMVIGFISADGSMDNTGIADYIVSNVKDPISRVQGVGETQVFGA
QHAMRIWLDPHKLNKFSLTSSDVVSAIQSQNTQVSVGELGGTPAVKGQQLTATITAQGRL
KSVKDFKNILLKVDTDGSQIRLQDVARIEIGGESYATVAEFNGSPATGLAIRLATGANAL
DTADAVRAKMEELKQFFPNSLKIVYPYDTTPFVKISIEEVVHTLIEAVVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTMGIMAAFGFSINTLTMFGLVLAIGLLVDDAIVVVENVERVM
AEDGLSPLEATRKSMGQITGALVGIALVLSAVFIPMAFFGGAAGAIYRQFSLTIVSSMAL
SVLVAMILTPALCATILRPLSEGSHQAKRGPIGLFNRLFNQGTVRYKGTVEKGIHQKIRY
LVVYVLIVGGLGLLWHKLPTSFLPDEDQGVLMVMVKLPSGATQERTLNVMEKIRGHFLQD
EKDDVVSVFTVAGFSFAGRGQNMGLAFVKLTDWSERTKPSQSVEAIIGRAWGALGQIKEA
QIFAFNLPPIISLGTASGFDAYLVDRGNLGHEALIQARNQLLGMAAKNPNLVSVRPNGME
DTAQLRIDIDYEKAMAMGVSVNDINSTLSTAWGSTYVNDFVDNGRIKKVYVQADAPFRMN
PEDFDLWHVRNSEGDMVPFNAFAKTYWTYGSPRLERFNASPAVNIQGSAAPGKSSGEAML
EIEKMVRQLPKGFDVEWSGSSYQERQSGSQASLLYGISLLIVFLCLAALYESWSVPFSVI
LIVPLGIFGAVLATTLKGLANDVYFQVGLLTTIGLSAKNAILIVEFAKAQYDEGMDLFKA
TVEACRMRLRPILMTSFAFILGVLPLALSSGAGAASRNAIGWGVVGGMVSATVLSIFFVP
VFFVLVMRLFRTKPRGDLSAAPAVEDKSDAN
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcttttttatcgacagaccgatttttgcatgggtgatcgcgatcgtcatcatg
ctggccggtgttctgtctatcaaaaccttaccgattgaacagtatccgcagattgcgccg
ccagcggttagcatttctggtgtttacgtcggtgcatctgcgaaaaccgtggaaaacagt
gtgacgcaggttatcgaacaaaacatgaacggtatcgataacctgttgtatatgtcttcc
aacagtgattcgtccggttcattttctatcagtctgacgtttgcgacggggacagacccg
gatatcgcacaggttcaagtacagaataaattgtctgccgttgaatcgtctctgcctgag
tcggttgtgacgcgggggattacggttgcaaaatcaaccagtagtttcttgatggtcatc
ggttttatttcagctgatggcagcatggataataccggtatcgcggattacatcgtttca
aacgtaaaagatccgattagccgtgtgcagggtgtgggtgaaacccaagtatttggggcg
caacatgcgatgcgaatctggcttgatccacacaaactgaacaaattcagtctgacttcc
agtgatgttgtcagtgcaattcagtctcagaatacccaagtatccgtcggtgaattgggt
ggcacgcccgcagtaaaagggcagcaactgactgcaacgatcacggctcaggggcgtctg
aagagcgtaaaagatttcaaaaatattttgcttaaagttgatacggatggctctcaaatc
cggttacaggacgttgcacgcattgaaatcggtggtgaaagttatgccactgttgctgag
tttaatggttcaccggcgaccggtctggcgattcggcttgcgacaggcgccaatgcactg
gatacagcggatgctgtgcgtgccaaaatggaagaattgaaacaattcttccccaactct
ctgaaaattgtttatccgtatgacacgaccccattcgttaaaatttcgattgaagaggtg
gttcataccctgattgaagcggtcgtgctggtctttttggtcatgtacctcttcttgcag
aacttccgtgcgactctgattccgaccattgcggtaccggtggtgttattggggacgatg
ggcatcatggctgccttcggcttttcgattaatactctgacgatgtttggtttggtgctg
gcgatcggtctgctggtggatgacgcaattgtcgtggtcgagaacgtcgagcgggtgatg
gctgaggatggtttatcgccattagaagcaacccgtaagtcgatggggcagattaccggt
gcattggttggtattgctctggttctgagtgcggtatttattccgatggctttctttggt
ggtgccgccggagcgatttaccggcagttctccttaacgattgtctcttctatggcgctg
tctgtgttggtggctatgatccttacaccggcactgtgtgcgacgattctaaggccgctt
tcagaaggcagtcatcaggcaaaacgcggaccgattggcctgtttaaccgattgtttaat
cagggaacggtgcgttataaaggcacggtcgaaaaaggaattcatcagaaaatcagatat
ctggtagtttatgtcttaatcgtcggtggcttaggtttgttgtggcacaaactaccgact
tcatttttgcctgatgaagatcagggtgtattaatggtgatggttaaactaccttccggt
gcaacgcaagaacggacactcaacgtgatggagaaaatccggggtcacttcttgcaagat
gaaaaagatgatgtggtctcagtctttactgttgcagggtttagttttgccggtcgcggc
cagaatatggggctggcattcgtcaaactcactgactggagtgaaagaaccaagccatca
cagtccgtcgaagccattatcgggcgagcatggggcgctctgggacagatcaaagaagcg
caaatatttgcgttcaacttgcctccgattatttcgttgggaacagccagtggctttgat
gcttatctggttgaccggggcaaccttggtcatgaggcattgattcaggctcgtaaccaa
ctgttgggaatggcagcgaagaacccgaatctggtgtctgtccggccaaacgggatggaa
gataccgctcagctccggattgatatcgattatgaaaaagcgatggcaatgggcgtttct
gtgaatgatattaactcaaccttatcgacggcatggggttcgacttatgtgaacgacttt
gtcgataacgggcggattaagaaagtgtacgttcaggctgatgcgccatttcggatgaat
cctgaagacttcgacctgtggcatgttcgcaattccgagggggacatggtgccgtttaac
gcctttgccaaaacgtactggacctatggatcgccacgactggagcgctttaatgcttcc
cctgcggtcaatattcagggttcggctgcgcccggaaagagttctggtgaggcgatgctt
gagattgaaaaaatggttcgccagttgccaaaaggctttgatgtggaatggagtggatct
tcgtatcaggaaagacagtccggttcccaagcctcgttactgtatggtatttctttgctt
atcgtattcctctgtctggctgcactttatgaaagttggagtgttcctttctcggtgatt
ttgattgtgccgttggggattttcggggctgtattagcgaccaccctgaaaggattagcg
aatgatgtttactttcaggtcggcctgttgacgacgattggtttgtcggcgaaaaatgcg
attctgatcgttgagtttgccaaagcccaatatgatgagggcatggatctgttcaaagca
accgttgaagcttgtcggatgcgtttacgtccgattctgatgacctcttttgcatttatt
ctgggggttttaccgttggcactgagtagtggtgcgggggctgccagccggaatgcgatt
ggttggggggttgtcggcggcatggtgtctgccacggtgttgtctattttctttgttccg
gtgttctttgtcttggtaatgcgtttgttccgcactaaaccaagaggcgatctctctgcc
gctcctgccgtggaggataagtcagatgcaaattaa
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