KEGG   Vibrio ruber: RND59_13090
Entry
RND59_13090       CDS       T09542                                 
Symbol
dgcA
Name
(GenBank) dimethylglycine demethylation protein DgcA
  KO
K21833  N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
Organism
vru  Vibrio ruber
Pathway
vru00260  Glycine, serine and threonine metabolism
vru01100  Metabolic pathways
Module
vru_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:vru00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RND59_13090 (dgcA)
Enzymes [BR:vru01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.7  With an iron-sulfur protein as acceptor
    1.5.7.3  N,N-dimethylglycine/sarcosine dehydrogenase (ferredoxin)
     RND59_13090 (dgcA)
SSDB
Motif
Pfam: Oxidored_FMN Pyr_redox_2 FAD_oxidored NAD_binding_8 Pyr_redox DAO FAD_binding_2 HI0933_like GIDA Thi4 FAD_binding_3 AlaDh_PNT_C Pyr_redox_3 NAD_binding_7 Dus Lycopene_cycl 3HCDH_N
Other DBs
NCBI-ProteinID: WNJ95056
LinkDB
Position
1:2888053..2890116
AA seq 687 aa
MSQFDILFQPLKINNLTIRNRIVSTAHAEVYATDGGMTTDRYVKYYEEKAKGGCGLCICG
GSSVVSIDSPQSWWSSVNLSTDRIIPHFQNLADAVHKHGGKIMIQITHMGRRSRWDGENW
PSLMSPSGIREPVHRATCKTIEEEEIWRIVGDFAKAAVRAKEGGLDGVELSAVHQHMIDQ
FWSPRVNKRTDQWGGTFENRMRFGMEVLKAVREAVGPDFVVGMRITGDEFHPDGLDHEEM
KKIAAYYNATNMVDYFGVVGSGCDTHNTLANVIPNMSYPPEPFLHLAAGIKEVVSVPVIH
AQNIKDPNQAKRILEGGYVDFVGMTRAHIADPHLIAKIKLDQTDQIRQCVGANYCIDRQY
MGLDVLCIQNAATSREYMGLPHIIEKTTGSVRKVVVVGGGPGGLEAARVAAERGHQVTLI
EKGEELGGQITIAAKAPQRDQMAGITRWLVMELERLGVEIILNTTVSAEMVREMQPDVCI
LATGGRPFIDQNPEWGAEEGLVVSSWDILNGTVEPGKNVLIYDTICEFSGMSAADYLTSK
GALVELVTDDIKPGVGIGGTTFPTYYRSLYEKEVIMTSDLMLEKVYREGDNLVAVLENEY
TGQREERVVDQIVVENGVRPNEELYYELKADSVNKGQIDNEALFAAAPQPVLSSSDKGMI
LWRLGDCVSQRNVHAAIYDALRLCKDL
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgtctcagtttgatattctgttccaaccattaaaaatcaataacctgacgattcgtaac
cgcatcgtcagtaccgcgcacgccgaggtatatgcaactgacggcgggatgacaaccgat
cgctatgtcaaatattatgaagagaaagccaaaggtggctgcggtctttgtatttgtggc
ggttccagtgtggtttctatcgacagtccacaaagttggtggagttcggtcaacctttca
acagacagaatcattcctcatttccaaaatcttgccgatgccgtgcataagcatggcggt
aaaatcatgattcagattacccacatgggacgacgctcacgctgggacggtgaaaactgg
ccaagtctcatgtcaccgtcagggattcgtgaaccggttcaccgcgcaacctgtaaaaca
attgaagaagaagagatctggcgcatcgtgggtgatttcgccaaggctgccgtacgggcg
aaagaaggcggtcttgacggtgttgaactttccgctgtccaccagcatatgattgatcag
ttctggtctccgcgggtcaataaacgcacggatcagtggggcggtacgtttgaaaaccga
atgcgcttcgggatggaagtgctgaaagcggttcgcgaagcagtcgggcctgactttgtg
gtcgggatgcggattaccggtgatgaattccacccggacggccttgatcacgaagagatg
aaaaaaatcgcagcttactataatgcgaccaacatggttgattacttcggtgtcgtaggg
tcgggctgtgatacgcataatacactggctaacgttatcccgaacatgagttatccgcct
gagccgttcctccatctggctgccgggattaaagaagtggtttctgtgccggtcattcac
gcgcagaacattaaagatccgaatcaggcgaaacggattcttgaaggcggttatgtggat
tttgtcggcatgacgcgtgcccacattgccgatccgcatctgattgccaaaatcaagtta
gatcagaccgatcagatccgccagtgtgtcggagcaaactactgtatcgaccgtcagtac
atgggcttagatgtgctgtgtattcaaaacgcggcgacctcccgtgaatatatgggcttg
cctcatatcattgaaaaaaccaccggttctgttcgtaaagtcgtggttgtcggtgggggc
cccggcgggctggaagcggctcgtgtggctgccgagcgtggtcatcaggtcacactgatc
gagaaaggtgaggaactgggcggacaaatcaccattgccgcgaaagcaccgcaacgtgat
cagatggccgggattacccgctggctggtgatggagctggagcgtctgggcgttgaaatt
attttaaacacgacggtgagtgccgagatggtgcgggaaatgcagccggatgtttgtatt
ttggcgaccggtgggcgtccgtttatcgatcaaaaccctgaatggggagcggaagaaggt
ctggtagtttcaagctgggatatcctcaacggcacggttgaaccgggtaaaaatgtgctg
atttatgacaccatttgcgagttctccggcatgtcagcagcggattacctgacatcgaaa
ggggcactggttgagttagtgaccgatgatatcaaaccgggcgttggtatcggtggtacg
actttcccgacttattaccgcagtttgtatgaaaaagaagtcatcatgacctcggatctg
atgctggaaaaagtctaccgcgaaggggataacctggttgcggtactggaaaatgaatac
accggtcagagagaagagcgcgttgtcgatcagatcgtggttgaaaacggtgtccgcccg
aatgaagagctgtactacgagctgaaagctgactccgtcaataaaggtcagattgataat
gaagcgctctttgctgcggcacctcagccggtgctgtcttcaagtgacaaaggcatgatc
ctgtggcgtctgggagactgtgtgtcacaacgtaacgttcacgctgcgatctacgacgca
ttacgtttgtgtaaagatctctaa

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