Vibrio scophthalmi: VSVS12_02365
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Entry
VSVS12_02365 CDS
T04650
Symbol
ogdH
Name
(GenBank) Oxoglutarate dehydrogenase (succinyl-transferring)
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00020
Citrate cycle (TCA cycle)
vsc00785
Lipoic acid metabolism
vsc01100
Metabolic pathways
vsc01110
Biosynthesis of secondary metabolites
vsc01120
Microbial metabolism in diverse environments
vsc01200
Carbon metabolism
vsc01210
2-Oxocarboxylic acid metabolism
Module
vsc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vsc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VSVS12_02365 (ogdH)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VSVS12_02365 (ogdH)
Enzymes [BR:
vsc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
VSVS12_02365 (ogdH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
ANS86126
UniProt:
A0A1B1NR03
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All DBs
Position
1:complement(2591629..2594484)
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AA seq
951 aa
AA seq
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MHNGVMKAWLESSHLAGANATYVEDLYELYLSDPDLVSEEWIRVFDGLPKPDQDVVEQPH
SRVRDYFRRLAQETKHYNVQVSDPDVDAKQVKVLQLINAYRFRGHEAAELDPLGLWNRPP
VVELDPSFHNLTEDDLEESFNVGSFAIGQETMRLKDILAALKKIYCGSIGAEYMHIIDTE
QKRWIQQRLEPVVGEPQFTSEEMRDFLDELTAAEGLERYLGAKFPGAKRFSLEGGDAMIP
MMKELIRHAGKSGMREVVIGMAHRGRLNMLVNVLGKKPQDLFDEFAGKHGESWGTGDVKY
HQGFSADFATPGGDVHLALAFNPSHLEIVNPVVMGSVRARQDRLGDKDGSTVLPITIHGD
SAIAGQGVVAETFNMSQARGYRVGGTVRVVVNNQVGFTTSNPRDMRSTMYCTDIAKMVQA
PIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEPNATQPLMYQKI
KKHPTPRKLYADVLIERGDYDIETATQMVNEYRDALDRGEVVVKEWRPMALHSVDWSPYL
GHEWDTQWDSQYGRERLVELGHRLCQVPESHKLQSRVNKLYNDRIAMMSGEKAVDWGMAE
TLAYATLVDDGKRIRISGQDAGRGTFFHRHSVLHNQTDASTYIPLANVHDKQGPFQVIDS
VLSEEAVLAFEYGYATAEPGGLTIWEAQFGDFANGAQVVIDQFISSGEQKWARLCGLTML
LPHGYEGQGPEHSSARLERYLQLCAEQNMQVVVPSTPAQVYHMIRRQVVRPMRRPLIVMS
PKSLLRHPLCTSSLDDLSEGTFLPAIPEIDQMDASKVKRVVFCSGKVYFDLLEQRRKDEQ
QDVAIVRIEQLYPFPLEEVKAAIEAYTNVEDFVWCQEEPQNQGAWYCSQHNFRAAIPAGT
DLKYAGRPASASPAVGYMSVHLKQQKALVEDALTIGANTSDSKTSNKELEV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacggcgtgatgaaggcatggctcgagtcttcacacttggctggcgccaatgca
acgtatgtagaggatctctacgaactgtatctaagtgatcccgatttggtaagtgaggag
tggattcgtgtatttgatgggctgcctaagcctgatcaggatgtagttgaacaaccgcat
tcacgtgtccgtgattacttccgtcgactcgctcaagaaacaaagcattacaatgtccaa
gttagtgaccccgatgtcgatgctaaacaagttaaagtactccagctgatcaatgcgtac
cgtttccgcggccatgaagcagctgaactcgatcccctcggtctatggaaccgccctccg
gtggttgaactagatccttcgttccacaatctcaccgaagacgacttagaagaaagtttc
aacgtaggttcgttcgccattggtcaagagaccatgcgattgaaagatattcttgctgcg
ttgaaaaaaatctactgtggttctatcggtgcagaatacatgcacatcatcgacaccgaa
cagaaacgttggatccaacaacgtcttgagccggtggttggtgagcctcaatttacttct
gaggaaatgcgagacttcttggacgagctaactgctgctgaaggtcttgagcgttactta
ggtgccaaattcccaggcgcgaagcgtttctcattggaaggtggcgatgccatgatccca
atgatgaaagagctgatccgtcatgcgggtaaaagtggcatgcgtgaggttgtgattggc
atggctcaccgtggtcgccttaatatgctggtcaacgttttgggtaaaaagcctcaagat
ttgtttgatgagttcgcgggcaagcatggtgaatcgtggggtactggtgatgtgaaatat
caccaaggtttctcggcagattttgctacgccgggcggcgatgtccacttagcactggca
tttaacccttctcaccttgagatcgtgaacccagttgttatgggctcggtgcgcgcgcgt
caagatcgtcttggtgataaagatggcagcacagtattaccgattaccattcacggtgac
tcagcgattgcgggccaaggtgttgtagcagaaaccttcaatatgtcgcaagcgcgcggc
tatcgagttggtggcacggtacgagtcgtggtcaacaaccaagttggttttaccacctct
aacccacgcgatatgcgttcaaccatgtactgtactgacattgcgaaaatggtacaggca
ccgatcttccacgttaatgctgatgatcctgaagcggtggcgttcgtgactcgaattgcg
cttgattaccgtaatgagtttaagcgtgacgtagtgattgatttggtttgttaccgtcgc
catggtcacaacgaagcggatgagccaaatgcgactcagccgttgatgtaccaaaaaatt
aagaagcacccaaccccacgtaaactatacgctgacgtgttgatcgaacgcggtgattat
gacattgaaacggcaacgcaaatggtcaacgagtaccgtgatgcgctagaccgcggtgaa
gttgtagttaaagagtggcgtccgatggcgttgcactctgtcgattggtcaccgtacctt
ggtcatgagtgggatacgcagtgggatagtcaatatggcagagagcgtctagttgagctt
ggccatcgcctatgtcaggttccagaaagtcacaagttacagagccgcgtaaataagctt
tacaacgatcgtattgccatgatgagtggtgagaaagcggttgactggggcatggctgaa
acattggcttacgcaacccttgttgatgatggcaagcgtatccgaatttcggggcaagat
gccggccgtggcaccttcttccaccgtcactcggtactgcataatcaaaccgatgcaagc
acctatatcccattggctaacgtgcatgataaacaaggtccattccaagtaatcgactcg
gtgttgtcagaagaagcggtattggcttttgaatatggctatgcgacagccgaaccaggt
ggtttaaccatttgggaagcgcagtttggtgatttcgccaatggtgctcaggtggtgatt
gaccagtttatctcatcaggtgaacagaaatgggcacgtttatgcggccttactatgttg
ttaccacacggctatgaaggtcaaggtcctgaacactcatcggcacgtttagagcgctat
ctacaactgtgtgctgaacaaaatatgcaggtggtcgttccttcgactccagctcaagtt
tatcacatgattcgtcgtcaggttgtacgcccaatgcgtcgtcctctgattgtgatgtcg
cctaagtccttgttgcgtcacccattgtgtacctcaagcttagatgatttatcggaaggc
accttcttgccagccatccctgaaattgatcagatggatgcgagcaaagtaaaacgcgtg
gtgttctgttctggtaaggtttatttcgatctacttgaacagcgtcgtaaggatgaacag
caagatgttgcgattgtccgtattgagcagctttatccattcccactggaagaagtgaaa
gcggcgatagaagcgtataccaacgtagaagattttgtttggtgtcaggaagagccacaa
aaccaaggtgcttggtattgtagccaacataacttccgtgcggcgatcccggcaggaact
gacctaaaatacgcaggtcgtccggcttcagcatcaccagcggtcggctatatgtcggtt
cacttgaaacaacaaaaagcgttggttgaagatgctctgactattggtgcaaacacctca
gattctaaaacctcgaataaagaactagaagtataa
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