Vibrio atlanticus: VS_1421
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Entry
VS_1421 CDS
T00812
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00220
Arginine biosynthesis
vsp00250
Alanine, aspartate and glutamate metabolism
vsp00430
Taurine and hypotaurine metabolism
vsp00910
Nitrogen metabolism
vsp01100
Metabolic pathways
vsp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
VS_1421
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VS_1421
00220 Arginine biosynthesis
VS_1421
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
VS_1421
Enzymes [BR:
vsp01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
VS_1421
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
Holin_BhlA
DUF3730
Motif
Other DBs
NCBI-ProteinID:
CAV18584
UniProt:
B7VNK8
LinkDB
All DBs
Position
1:1557306..1562147
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AA seq
1613 aa
AA seq
DB search
MTARETVVPVLLEKVYKLIQDKLDLAHRPLVTQLAQHLFSNVSHDDLTQRNESDLYGAVV
SLWHHINEKKADQISVRVFNPTVSRQGWQSTHTIVEIVVPDSPFLVDSVKMALTRLDLSS
HLMLHNPTQISRSDKGSVVGVSNNEGAFQSLFHIEVDRLSSKAEMTALKTELLDIFTDTG
LVVNDWLKMVEKLEEVTNQVEKQKESIPVDGQRFDETLAFLRWLGEHNFTFMGYKEYDLV
SVNGDTELQPTKEQGLGLFANSDRVRNVKLSEFSDSARLEAKKPYVLIVTKGNTASRIHR
PAYNDYIGIKKFDKNGKVIGEHRFTGLYTSAVYNQTVETIPLVREKVERILDASGYREGS
YSYKALHNILENYPRDELLQAREEELLEVGTGVVQMQDRDLLRLFVRKDPFGRFFSCMVY
VTKDRYNTELRRQTQRILKQYFGCEEEVEFTTYFSESPLARTHYIVRVDNNNMDVDVKTI
EQNLMEVSSTWDDRLSESIVANFGESKGLPLSKEYMRAFPRSYKEDMMPGSAVADIERLE
ALSEDNKLGMLFYRPQEEAADSKAVRLKLFYHSDEPIHLSDVMPMLENFGLRVIGESPYE
VRKTNGVTYWILDFSMLHKSDKTIDLREARDLFQQAFAAIWEGELDSDGFNRLVLGAALS
GREISILRAYARYMRQVGFPFSQQYIEDTLSHYPDLAKGLVSLFGKRFDPKLKGSAKGQQ
DLIKKITEQLDHVESLDDDRIIRRYMEMITATLRTNYYQLDDNKQSKPWLALKMRPSEIP
DIPAPVPAFEIFVYAPDIEGVHLRGGKVARGGLRWSDRQEDFRTEILGLVKAQQVKNTVI
VPVGAKGGFVCKRQHTMSGRDEIFAEGQRCYKRFIRALLDVSDNIIEGEVIPPKSVVRHD
EDDPYLVVAADKGTATFSDLANSVSAEYNFWLGDAFASGGSNGYDHKAMGITAKGGWESV
KRHFREMGINCQTTDFTAIGVGDMAGDVFGNGMLLSKHIRMQAAFNHMHIFIDPNPESAS
SWVERERLFNLPRSSWEDYNKDLISQGGGIFSRRAKSISLTPEIQKMLGTKKASMAPNDL
IKAILSMQVDLLWNGGIGTYVKSSNETHTDVGDRANDVLRIDGRDLKAKVVGEGGNLGMT
QLGRIEYALTGGRVNTDFVDNVGGVDCSDNEVNIKIFLNGLVSNGDLTVKQRNQVLESME
DEVGEIVLDDAYCQAESISVTEHQGVGLVKEQIRFIHTMEKAGYLDRGLEYIPDDETLLE
REKQGQGLTRPELSVLVAYGKMVLKEDLVSDDIANDEFHAQQLMQYFPTALRRNYSQHMD
NHPLRSEIIATALANQMVNEMGCNFVTRLQEETGANIVDIANAYAATREIYGLGKVLKSI
RELDNVSSSEAQYELIYHVRRTLRRLARWLLRNRTGKQSVKALIELYQGDVLTITEKLDE
NLVASEVEEHNAMAQLWIDQGVNAELANSVARLSSLYSALDISTVARETGKTVQQASKLY
FNLGDRLSLHWFLKQINGQAVDNNWQALARAAFREDLDWQQRQLTGQVLNCGCASDIDVI
KALDDWMESNSVSLHRWESILNEFKVGSVHEFAKFSVALRELMLLNLNCMSTD
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacgtgaaactgtggttccagttttacttgaaaaagtttacaaactgattcaa
gacaaacttgaccttgctcatcgacctctcgtaactcaacttgctcaacacttgtttagt
aacgtttctcacgacgatctaactcagagaaacgaatccgatttatacggtgctgtagtt
agcttatggcatcacatcaatgaaaagaaagctgaccaaatctctgttcgtgtttttaac
ccgacagtaagtcgtcaaggttggcaatctactcacactatcgtagagatagtcgtacca
gatagcccattccttgtagactctgtaaaaatggcgctgactcgcctagacctttcttct
caccttatgcttcacaatccaacacaaatctctcgctctgataagggcagtgttgtcggc
gttagcaataacgaaggtgcattccaatcgcttttccatatcgaagtagaccgtcttagc
agcaaagctgaaatgacagcgctcaaaacggaactactggatatctttaccgatactggt
ttagtcgtgaacgattggctgaagatggttgaaaaacttgaggaagtaacgaatcaagtt
gaaaagcaaaaagaaagcattcctgtagacggccaacgttttgatgagacgttggcgttt
cttcgttggttaggcgagcacaactttacgtttatgggttacaaggaatatgaccttgtt
tctgtaaatggcgacacagaactacaaccgaccaaggagcaaggtcttggtttgtttgcg
aattcagatcgtgtgcgtaacgttaagctgtctgagttttctgattcggcacgtcttgaa
gccaaaaagccgtatgtacttatcgtaaccaagggcaatacggcttcgcgcattcaccga
ccagcttacaatgattacattggtattaagaagttcgataagaacggtaaggtcattggt
gaacaccgctttactggtctttacacctctgccgtttataaccaaaccgttgaaacgatt
cctcttgttcgcgagaaagtagagcgcatcttagacgcgagtggttaccgtgaaggttca
tactcttacaaagctctgcacaacattttagaaaactacccgcgagatgaactgcttcaa
gctcgtgaagaagaattgctagaagtcggtactggcgtagttcaaatgcaagatcgcgat
cttctgcgtttgtttgttcgcaaagacccgtttggccgtttctttagctgcatggtttac
gttactaaagatcgttacaacaccgaacttcgtcgtcaaacccaacgcatcttgaagcag
tatttcggttgcgaagaagaggtcgaattcactacatacttctctgaaagcccactggcg
agaacgcactatattgttcgtgttgataacaacaacatggatgtggacgtgaaaacaatt
gagcaaaatttaatggaagtatcgtctacgtgggatgaccgcctgtctgaatcaatcgtt
gctaacttcggtgagagcaaaggtcttccgttatcgaaagagtacatgcgtgcattccca
cgttcgtacaaagaagacatgatgcctggttctgcggttgcagatatcgagcgtttagaa
gcactaagtgaagacaacaaactgggcatgcttttctaccgccctcaagaagaagcggca
gactctaaagctgttcgtttgaagctgttctaccacagtgatgagccgattcacctgtct
gatgttatgccaatgcttgaaaattttggcctgcgcgttattggtgaatcaccttatgaa
gtacgtaagaccaatggggtgacttattggatccttgatttctcgatgctgcataagagt
gacaagacgattgatcttcgtgaagcgcgcgatctattccaacaagcctttgctgcgatt
tgggaaggtgaattagacagcgatggttttaaccgcttggtattgggtgctgctctttct
ggccgtgaaatctcaatcttacgtgcgtatgcgcgttacatgcgccaagtgggtttccca
tttagccaacaatacattgaagacacattgtctcattacccagatctagcgaaagggtta
gtgagcttattcggcaagcgttttgatcctaaattaaagggtagcgcgaaaggccaacaa
gatcttattaagaagatcactgaacagttggatcatgtagaaagcttggatgatgatcgt
atcattcgtcgttacatggaaatgatcacagcaacgcttcgtactaactactaccagtta
gacgacaacaaacagtctaaaccttggttggctctgaaaatgagaccaagcgagatccca
gatatcccagcaccggttcctgcgtttgagattttcgtttacgcaccagacattgaaggt
gtgcatctacgtggcggtaaagtcgctcgtggtggtttacgttggtcagaccgtcaagag
gatttccgtactgagattctaggcctagttaaagcacagcaagttaagaacacagtaatt
gtaccggttggtgcaaaaggtggtttcgtttgtaagcgtcaacacactatgtctggccga
gacgagatcttcgctgaaggtcaacgttgttacaagcgcttcatccgtgcactactagac
gtatcagacaacatcattgaaggtgaggttattccacctaagagcgttgttcgtcacgat
gaagatgatccgtatttggttgttgccgccgataaaggtaccgcaacgttctcagatcta
gcaaactcagtatctgctgaatacaatttctggttaggtgatgcatttgcctctggtggc
tctaacggttatgaccataaagccatgggtatcacggcgaaaggtggctgggaatctgtt
aaacgtcacttccgtgaaatgggcatcaactgccaaacaacggacttcaccgctatcggt
gtcggtgatatggcgggcgatgtgtttggtaacggtatgctgttgtctaagcatattcgt
atgcaagctgcgtttaaccacatgcatatcttcatcgatccgaatccagaatcagcatca
agctgggtagagcgtgagcgcttgtttaatctacctcgctcaagctgggaagattacaac
aaagaccttatctctcaaggtggtggcatcttctctcgtcgagcgaagtctatctctttg
acgcctgaaattcagaaaatgctaggtactaagaaagcatcaatggcaccgaatgacttg
atcaaagcgatcttgtctatgcaggttgatcttctttggaatggcggtatcggtacttac
gttaagtcttcgaacgagactcatactgacgtaggtgaccgtgcaaatgacgtccttcgt
atcgatggccgtgacctgaaagctaaggttgttggtgaaggcggtaacttgggtatgact
caattgggtcgtattgaatatgcgctgacgggtggccgcgttaatactgacttcgttgat
aacgttggtggtgttgactgttcggataatgaagtaaacattaagatcttcttgaatggt
ttggtgtctaatggtgatctaaccgttaagcaacgtaaccaagtgcttgaatcgatggaa
gatgaagtcggcgaaatcgtactagacgacgcatattgccaagctgagtctatttcggtt
acggagcatcaaggtgttggcttagtaaaagagcaaatccgctttattcatacaatggaa
aaagcagggtacttggatcgtggtttggaatacatcccagatgacgaaacactgcttgag
cgtgaaaagcagggccaaggcctaacaagacctgagctttctgtacttgtcgcttacggt
aaaatggtgcttaaagaagatcttgttagtgatgatatcgctaatgacgaattccatgct
caacagcttatgcagtacttcccaactgcgttacgtcgtaactactctcagcacatggac
aatcatccactacgttctgaaattattgcgacggcactggctaaccaaatggttaacgag
atgggttgtaacttcgttactcgtctgcaagaagagacgggcgcaaatattgttgatatt
gccaatgcttacgcagcaacacgtgaaatctatggtcttggcaaagttctgaagagcatc
cgtgaactggacaatgtttcaagttctgaagctcaatatgaattgatctaccatgttcgc
cgtacacttcgtcgcttggcacgttggttgttaagaaaccgtactggtaaacagtcagtg
aaagcattgattgaactttaccaaggcgatgttcttactatcacagagaaactggatgaa
aacctagtggcttctgaagtagaagagcataacgcaatggcacagttatggattgaccaa
ggcgtaaacgctgaattggctaattcggttgcgcgtttgtctagcttgtactcggcactg
gatatatccacagtggctcgtgagacgggtaaaacagtacaacaagcgtcgaagctttac
ttcaaccttggcgatcgtttgtctctgcactggttcttgaagcaaatcaatggtcaagct
gtagataacaactggcaagcactagcgcgtgcagcattcagagaagatctggattggcag
caacgtcagctaactggccaagtgcttaactgcggttgtgcttcagacatcgatgtgatt
aaagcgcttgatgattggatggaaagtaactctgtttctctacatcgttgggaaagtatc
ctcaatgaattcaaagtgggctcggttcatgagtttgccaagttctcagtagcactgcgt
gaattgatgttgttaaatctaaattgcatgtcgacagattag
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