KEGG   Vibrio spartinae: Vspart_01898
Entry
Vspart_01898      CDS       T07037                                 
Symbol
stcD
Name
(GenBank) putative N-methylproline demethylase
  KO
K21833  N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
Organism
vsr  Vibrio spartinae
Pathway
vsr00260  Glycine, serine and threonine metabolism
vsr01100  Metabolic pathways
Module
vsr_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:vsr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Vspart_01898 (stcD)
Enzymes [BR:vsr01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.7  With an iron-sulfur protein as acceptor
    1.5.7.3  N,N-dimethylglycine/sarcosine dehydrogenase (ferredoxin)
     Vspart_01898 (stcD)
SSDB
Motif
Pfam: Oxidored_FMN Pyr_redox_2 FAD_oxidored NAD_binding_8 FAD_binding_2 Pyr_redox HI0933_like DAO GIDA Thi4 AlaDh_PNT_C FAD_binding_3 Pyr_redox_3 NAD_binding_7 Dus Lycopene_cycl
Other DBs
NCBI-ProteinID: QMV14637
LinkDB
Position
1:complement(2120490..2122553)
AA seq 687 aa
MSQFDILFQPLKINNLTIRNRIVSTAHAEVYATDGGMTTDRYVKYYEEKAKGGCGLCICG
GSSVVSIDSPQSWWSSVNLSTDRIIPHFQNLADAVHKHGGKIMIQITHMGRRSRWDGENW
PSLMSPSGIREPVHRATCKTIEEEEIWRIVGDFAKAAVRAKEGGLDGVELSAVHQHMIDQ
FWSPRVNKRTDQWGGTFENRMRFGMEVLQAVREAVGPDFVVGMRITGDEFHPDGLDHEEM
KKIAAYYDATNMVDYFGVVGSGCDTHNTLANVIPNMSYPPEPFLHLAAGIKEVVSVPVIH
AQNIKDPNQAKRILEGGYVDFVGMTRAHIADPHLITKIKLDQTDQIRQCVGANYCIDRQY
MGLDVLCIQNAATSREYMGMPHIIEKTTGPVRKVLVIGGGPGGLEAARVAAERGHQVTLI
EKGEALGGQITIAAKAPQRDQMAGITRWLAMELDRLKVEIILNTNASAEMVREMSPDICI
LATGGHPFIEQNPEWGAAEGLVVSTWDILNGTVEPGKNVLIYDTICEFSGMSAADYLASK
GAMVELVTDDIKPGVGIGGTTFPTYYRSLYEREVIMTSDLILEKVYREGDNLIALLENEY
TGQQEERVVDQIVVENGVRPNEALYYALKADSINKGQIDNEALFASAPQPVLSADDQGMI
LWRLGDCVSQRNTHAAIYDALRLCKDL
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgtctcagtttgatattctgttccaaccattaaaaatcaataacctgacgattcgcaac
cgcatcgtcagtaccgctcacgccgaggtgtacgcaaccgacggcggtatgacaacggat
cgctatgtcaaatattatgaagagaaagccaaaggcggctgtggtctttgtatttgtggc
ggttccagtgtggtttctatcgatagcccacaaagttggtggagttcggtcaatctttca
acagacagaatcattcctcatttccagaatcttgccgatgccgtccataaacatggcggt
aaaatcatgattcagattactcatatgggacgccgttcgcgctgggatggtgaaaactgg
ccgagtctcatgtcaccgtcggggatccgtgaaccggttcaccgcgcaacctgtaaaacc
attgaagaagaagagatctggcgtatcgttggtgatttcgccaaggcggcggtacgggcc
aaagaaggcggtcttgatggtgtggagctttccgcggttcaccagcatatgattgatcaa
ttctggtctccccgggtcaacaaacggactgaccaatggggaggaacgtttgaaaaccgg
atgcgcttcgggatggaagttttgcaagcggtccgtgaagcggtcggccctgactttgtg
gtcggtatgcgaattaccggtgatgaattccacccggatggccttgatcacgaagagatg
aaaaaaatcgccgcttactatgatgcgacgaacatggtggattacttcggtgtcgtcggc
tccggctgtgatacgcacaatacactggctaacgttattccgaatatgagttatccgcca
gagccgttcctccatctggcagccgggattaaagaagtggtttctgtgccggtgattcac
gcacagaacattaaagacccgaatcaggcgaaacgtatccttgaaggcggttatgttgat
tttgtcgggatgacccgtgcacatattgccgatccgcacctgattaccaaaatcaaactg
gatcagactgatcagatccgtcagtgtgtcggggcaaactactgtatcgaccgtcaatat
atggggttagacgttctctgtatccaaaatgctgcgacatcccgtgaatatatggggatg
ccacatattattgaaaaaaccactggccccgtccgtaaagttttggtgatcggtggtggt
cccggcgggcttgaagccgcaagggtggcggcagagcgcggccatcaagtgacgctgatc
gaaaaaggtgaagcgctgggcggacaaattaccattgccgcaaaagcaccacagcgtgat
caaatggccgggattacccgctggctggcgatggagctggatcgtttaaaggttgaaatt
attctcaacacgaatgccagtgcggagatggttcgggaaatgagtccggatatttgtatt
ctggcgacaggcggacatccgtttatcgagcaaaaccctgaatggggtgcagcagaaggt
ctggtcgtttcgacttgggatattctcaacggaaccgttgagccgggtaagaatgtgttg
atttatgacaccatttgtgaattctccggcatgtcagccgctgattacctggcgtcgaaa
ggcgcgatggttgaattggtgacagatgatatcaaaccgggcgtcggcatcgggggcacc
accttcccgacgtattaccgcagtttgtatgagcgagaagtcatcatgacctctgatctg
atactcgaaaaagtctaccgagagggcgataacctgattgcgcttctggaaaatgagtat
accggtcagcaagaagagcgggttgtcgatcagatcgtcgttgaaaatggtgtccgcccg
aatgaagcgctgtactacgcactgaaagctgactcgatcaacaaaggtcagattgataat
gaagcgctctttgcttcagcccctcagcccgtgttgtctgctgatgaccaaggcatgatt
ctgtggcgtttgggagactgcgtgtcacaacgtaacacccacgctgcgatctacgacgca
ttacgtctgtgtaaagatctctaa

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