Virgibacillus salarius: PD280_16295
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Entry
PD280_16295 CDS
T10331
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vss Virgibacillus salarius
Pathway
vss03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PD280_16295 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vss03400
]
PD280_16295 (nth)
Enzymes [BR:
vss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PD280_16295 (nth)
DNA repair and recombination proteins [BR:
vss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PD280_16295 (nth)
Prokaryotic type
PD280_16295 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
WBX79287
LinkDB
All DBs
Position
3236331..3236990
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AA seq
219 aa
AA seq
DB search
MLNKKQIRFCLDEMKKMFPYAECELEHENPFELVIAVLLSAQCTDTLVNKVTKELFKKYK
TPEDYLAVPLEELQNDIKSIGLYRNKAKNIRKLCTVLLEEYGGIVPKSKTELVKLAGVGR
KTANVVASVAFGEPAIAVDTHVERVSKRLGICRWKDTVIEVEETLMRKVPKEEWSETHHR
MIFFGRYHCKARNPNCPECPLLEVCREGQKRMRTASQKS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgctgaataaaaaacagattagattttgtttagatgaaatgaaaaaaatgtttccttat
gctgaatgtgaactggagcatgaaaatccttttgagttggttatagcagtacttttatcc
gcacagtgtacggatacattagtaaataaagtaacgaaagaattatttaagaaatataaa
acaccagaggattatcttgcagtgcctttagaggagctgcagaacgatattaagtcaatt
ggtttatatcggaataaggcaaaaaatatccgtaaactatgtaccgttcttttggaggaa
tatggtggtattgtcccaaaatcaaaaacagagcttgttaaattagctggagttggtaga
aaaacggcaaatgtggtagcatctgttgcattcggtgagcctgcaatagctgtggatacg
catgttgagcgtgtatcaaagcgtctaggtatttgtagatggaaggatacggtcatagaa
gtagaagaaacattgatgcggaaagtgccaaaagaggaatggagcgaaacacatcatcgc
atgatattttttggtaggtatcattgtaaagcaagaaatccaaactgtccagaatgtcca
ctgttagaggtgtgtagagaagggcaaaagcggatgcgcactgcttcccaaaagtcataa
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