Vitreoscilla stercoraria: LVJ81_02115
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Entry
LVJ81_02115 CDS
T08153
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vst
Vitreoscilla stercoraria
Pathway
vst03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LVJ81_02115 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vst03400
]
LVJ81_02115 (nth)
Enzymes [BR:
vst01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LVJ81_02115 (nth)
DNA repair and recombination proteins [BR:
vst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LVJ81_02115 (nth)
Prokaryotic type
LVJ81_02115 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UOO92862
LinkDB
All DBs
Position
447491..448123
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AA seq
210 aa
AA seq
DB search
MNKQIRYEIFSRLREANPHPTTELVFDGPFQLLIAVLLSAQTTDVAVNKVTAVLFDLAPN
PQAMLALGEEKVRDTIKTIGLYKTKAAHVIATCDAILNHFGGQVPQTREALETLPGVGRK
TANVVLNTAFGQPTMAVDTHIFRVGNRTGIAKGKNVREVEDQLVKHIPKEFMVDAHHWLI
LHGRYTCKALKPQCATCLIEDLCDYKAKAL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaaatacgttatgaaatttttagccgtttgcgtgaggccaatccacatcca
accacagaattggtttttgatggtccatttcaattgttgattgcagtgttgttgtcagca
caaaccaccgatgtggcagtgaacaaagtgacggcagttttgttcgatttggcacccaat
ccacaagcgatgttagcactgggcgaagaaaaagtgcgtgacaccattaaaacgattggt
ttatacaaaaccaaagctgcccatgtgatagcaacttgtgatgcgatattgaaccatttt
ggcggtcaagtgcctcaaactcgtgaggctttggaaaccttgccaggagttgggcgtaaa
acagccaatgtggtactcaatactgcgtttggtcagccaacgatggcggtagatacgcat
atttttcgggtgggtaatcgaacaggtattgccaaaggcaaaaatgtgcgcgaagtggaa
gaccaattggtcaaacacattcccaaagagtttatggtggatgcgcaccactggttgatt
ttgcatgggcgttatacatgtaaggcattgaaaccgcagtgtgcgacctgtttgattgaa
gatttgtgcgattacaaagctaaagccttgtaa
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