Varunaivibrio sulfuroxidans: P3M64_08920
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Entry
P3M64_08920 CDS
T08892
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
vsu
Varunaivibrio sulfuroxidans
Pathway
vsu00270
Cysteine and methionine metabolism
vsu00450
Selenocompound metabolism
vsu00670
One carbon pool by folate
vsu01100
Metabolic pathways
vsu01110
Biosynthesis of secondary metabolites
vsu01230
Biosynthesis of amino acids
vsu04980
Cobalamin transport and metabolism
vsu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
P3M64_08920 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
P3M64_08920 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
P3M64_08920 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
P3M64_08920 (metH)
04980 Cobalamin transport and metabolism
P3M64_08920 (metH)
Enzymes [BR:
vsu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
P3M64_08920 (metH)
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GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
MtrH
baeRF_family3
Motif
Other DBs
NCBI-ProteinID:
WES29769
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Position
1882652..1886359
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AA seq
1235 aa
AA seq
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MPTSSKPLDKTALLKEILSQRILVLDGAMGTMIQRHRPEEGDYRGDRFADHVGELKGNND
LLSLTRPEIIQGIHEAYLEAGADIVETNTFNATAISQADYNLEDIVYELNVEGARLARAA
CDVFETATRPRFAAGVLGPTNRTASISGDVNDPGARNVTYDNLRAAYGEAVRGLIDGGAD
LILIETVFDTLNAKAAVHAVLDHFEAHDIHLPIMLSGTITDASGRTLSGQTAEAFWNSLA
HARPLSTGFNCALGAEDLRPHIQAVGAIADTHVSVHPNAGLPNAFGEYDDTPEYMAKVLR
GFAEDGLLNIVGGCCGTTPDHIKAIARAVADVAPRRVPTHTPVSRLSGLEPLVIDETTGF
VNVGERTNVAGSTKFKNLIANGEFSTALEIARLQVENGAQIIDVNMDDAMLDAEKAMVTF
LNLIASEPDISRVPIMIDSSKWEVVVSGLKCVQGKGVVNSISLKEGEDAFVARAHDILRF
GAAVVVMAFDEDGQADGYRRMIDICRRSYAILTEKVGFPAEDIIFDPNIFPIATGIDEHR
NFSLDFINATGWIKQNLPHALVSGGVSNMSFSFRGNNPLREAMHSVFLYHAVKAGMNMGI
VNAGQLTIYADIPEALRARVEDAVLNRREDATERLLDVAEEARGHGAKSTGPDLSWREQP
VVKRIEHALVKGIDEFIEEDTEEARTQFARPIEVIEGPLMDGMNVVGDLFGSGQMFLPQV
VKSARVMKRAVAYLLPYIEAEKKDGQDAPTAKGRILMATVKGDVHDIGKNIVGVVLQCNN
YEVIDLGVMVPYSKILETAKTEKVDIIGLSGLITPSLEEMVTVAQEMKRQDFTIPLMIGG
ATTSKVHTAVKIAPQYAGPVIYVLDASRAVGVASNLLSDTLKDGYVGEIAAEYEAVRDAH
ARGQREKNRRSLSAARAARHTLEWTKTPPPKPTFLGLKVFKDYPLERLVERIDWTPFFRT
WELKGNYPAILDDPTVGKVARDLFRDAQNMLDKIVGEKWLGASAVIGLWPANQVGADDVE
IYTDDGRNTVRAQVHFLRQQMEKSEGRFNNCLADYVAPKDSGVADYIGGFAVTAGIGIAE
KSAQFKAAHDDYSDILLKALADRLAEAFAEHMHERVRREFWGYAHEENLSNTDLIKERYR
GIRPAPGYPACPDHTEKATLFALLDAPSNAGIDLTEGFAMSPAASVSGFYFSHDEARYFG
IGKIDKDQVEDYARRKGMTVEDVERWLAPNLGYAR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgtcatccaaacctctcgataaaaccgcccttctcaaggaaattctgtcgcag
cggattttagtgttggacggcgccatgggcaccatgatccaacgccatagacccgaggag
ggcgattatcgcggcgatcgcttcgccgatcacgtgggcgagctgaagggcaacaacgat
ctgctgtcgttgacccgtcccgaaatcatccaaggcattcacgaggcctatctggaggcc
ggcgccgatatcgtcgagaccaacaccttcaatgcgacggcgatctcccaggccgactat
aatctggaggatatcgtctacgaactcaacgtcgaaggcgcgcgtctggcgcgggcggcc
tgcgatgttttcgaaaccgcgacgcgaccgcgcttcgccgccggcgtgttggggccgacc
aaccgcaccgcgtcgatttccggcgacgtcaatgaccccggcgcgcgcaacgtcacctat
gacaaccttcgcgccgcctacggcgaggcggtgcgcggcttgatcgacggcggcgccgac
ctgatcttgatcgaaaccgtattcgacaccctaaacgccaaggcggcggtgcacgcggtc
ctcgaccatttcgaggcccacgatatccacctgccgatcatgctgtcgggcaccatcacc
gacgcctcggggcgcaccctgtcgggccagaccgccgaggcgttctggaactcgctggcc
cacgcccgaccgctatcgaccggcttcaactgcgccctgggcgcggaagacctgcgcccc
cacattcaggcggtcggtgcgatcgccgacacccacgtcagcgtccatcccaacgccgga
ctgcccaacgcgttcggtgaatacgacgacacccccgaatacatggccaaggtgctgcgc
ggcttcgccgaggacggtctgctcaatatcgtcggtggatgctgcgggaccacgcccgat
cacatcaaggcgatcgccagggcggtcgccgacgtcgccccccgccgggtgcccacccac
accccggtcagccgcctcagcgggctggagcccctggtcatcgacgagaccaccggcttc
gtcaacgtcggcgaacgcaccaacgtcgccggatcgaccaagttcaaaaatctcattgcg
aacggcgaattttccaccgccctggaaatcgctcgcctgcaggtcgaaaacggcgcgcag
atcatcgacgtcaacatggacgacgccatgctcgacgccgaaaaggcgatggtgaccttc
ctcaacctgatcgccagcgagccggacatcagccgcgtgccgatcatgatcgattcgtcg
aaatgggaggtcgtcgtctccgggctgaagtgtgtgcaaggcaagggcgtagttaactcg
atcagcctcaaggaaggcgaggacgctttcgtcgcgcgggcccacgatatcctgcgtttc
ggcgccgcggtcgtggtcatggccttcgacgaggacggtcaggccgacggttatcggcgg
atgatcgacatctgccgtcgttcctatgcgatcttgaccgaaaaagtcggttttcccgcc
gaggacatcatcttcgaccccaatatcttcccgatcgccaccggcatcgacgagcatcgc
aatttctcgctcgacttcatcaatgcgaccggatggattaaacaaaacttgccccacgcc
ctggtttcgggcggagtgtccaacatgtcgttttccttccgcgggaacaatcccctgcgc
gaggcgatgcattcggtctttttgtaccatgccgtcaaggcgggtatgaacatggggatc
gtcaacgccgggcaactgacgatctatgccgatatccccgaagccctgcgcgcgcgggtc
gaggacgccgtcctcaaccgccgcgaagacgccaccgagcggcttttggacgtcgccgag
gaggcccgcggacatggcgcgaagtccaccgggccggatctttcatggcgcgaacagccg
gtcgtcaaacgcatcgaacacgccctggtgaaggggatcgacgagttcatcgaggaagac
accgaggaggcgcgcacccagttcgcgcgccccatcgaggtcatcgaaggcccgctgatg
gacggcatgaacgtggtcggcgacctgttcgggtcgggacagatgtttttgccccaggtc
gtcaagtcggcccgcgtcatgaaacgagcggtcgcctacctgctgccctatatcgaggcg
gaaaagaaagatggacaggacgcgcccacggccaagggccgcatcctgatggcgacggtc
aagggcgacgttcacgacatcggcaagaacatcgtcggcgtcgtcttgcaatgcaacaac
tacgaggtcatcgacctcggcgtgatggttccctacagcaagattctggaaaccgcgaag
acggaaaaagtcgatatcatcggcctttccggtctgatcacgccgtctctggaagaaatg
gtcaccgtcgcccaggaaatgaagcgccaggacttcaccatcccgctgatgatcggtggg
gcgaccacctccaaagtgcacaccgcggttaaaatcgcgccgcaatatgccgggccggtc
atttatgtcctcgacgcctcacgcgcggtgggggtcgcctccaacctgctgtccgacacc
ctgaaagacggctacgtcggtgaaatcgcggccgaatacgaagccgttcgcgatgcccac
gcccgcggccaaagagaaaaaaatcgacgttccttaagcgcggcgcgcgccgcgcgtcat
actctcgaatggaccaaaacgccgccgcccaagccgaccttccttggccttaaggtattc
aaggactatcctctcgaacgactggtcgagcgcatcgactggacgccgtttttccgcacc
tgggaattgaaaggcaactatcccgccattttggacgaccccaccgtcggcaaggtcgcc
cgcgacctgtttcgcgacgcccagaacatgttggataagattgtcggcgaaaaatggctc
ggcgcaagcgccgtcatcggcctatggccggccaatcaggtcggcgcggacgatgtcgag
atctataccgacgacggtcgcaacaccgttcgcgcgcaagtccatttcctgcgccagcaa
atggaaaaatcggagggccgctttaacaattgcctggccgattacgtcgcccccaaggac
agcggcgtcgccgattacatcggcggtttcgcggtcaccgcgggcatcggaatcgcggaa
aagtcggcccaattcaaggccgcccacgatgattattccgacatcttgctgaaagccctc
gccgaccgtctggccgaggccttcgccgaacacatgcacgaacgggtgcgccgcgaattc
tggggctacgcccacgaagagaacctatccaacaccgacctaatcaaggaacgctatcgc
ggcatccgcccggccccagggtacccggcgtgccccgaccacaccgaaaaggcgactctg
ttcgcgttgctggacgcgccgagcaacgccggcatcgacctgaccgagggcttcgccatg
tcgcccgccgccagtgtttcagggttttatttttcccacgacgaggcgcgctatttcggc
atcggcaagatcgacaaggatcaggtcgaggattacgcccggcgcaagggcatgacggtg
gaggacgtcgagcgctggctcgcccccaacttaggctatgcgcgttaa
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