Varunaivibrio sulfuroxidans: P3M64_09480
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Entry
P3M64_09480 CDS
T08892
Name
(GenBank) NAD-glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
vsu
Varunaivibrio sulfuroxidans
Pathway
vsu00220
Arginine biosynthesis
vsu00250
Alanine, aspartate and glutamate metabolism
vsu00430
Taurine and hypotaurine metabolism
vsu00910
Nitrogen metabolism
vsu01100
Metabolic pathways
vsu01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
P3M64_09480
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
P3M64_09480
00220 Arginine biosynthesis
P3M64_09480
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
P3M64_09480
Enzymes [BR:
vsu01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
P3M64_09480
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Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_HM1
GDH_ACT3
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
WES29871
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All DBs
Position
2004205..2009079
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AA seq
1624 aa
AA seq
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MNAELERKAARIGEAVTIARKGLKGDAGDLAERFLRGYYAHVPPEDVIAFRPERLAGAAG
AHRAMGSVRQRGKPKIRVYNPSVSQHGWRISHTVIEIVTDDMPFLVDSVTSELNRRGLNV
LLTLHPILRVRRDARGRMLDVLDTGVLGADDGVFNESFMHMQIAAIPKTLFREIERAIAD
VIGDVVAAVEGWQPMRLRLGELIDELESLPIGVSLDEISEVRDFLRWLYEDHFTFLGYRE
YTFSGTDDTAKVSINKGSGLGVLRNPDKIVFQELHELASLPPEVHDFVHRPDLLMVNKTN
TLSTVHRPVHMDSVGIKRLDAQGKVVGERVFVGLFTASAYTRSLRDIPLLRRKMSRTFDR
AGLPASSHDGKALLNILETYPRDELFQISEDTLLDIALGILHLQDRQRVALFLRKDDFER
FISCLIYIPRDRYTTDLRMRMQAVLEDAFAGKVTSHSAQLGSTALARLHVIVETTPGAIP
EFNVDVLEKKLIDTARSWSDSMLNVLIGCCDEQEGTRLFHRYQKAFPAGYRERYDVADSL
EDILHVEETSQENRLNMNLYQDGDGADGRFRFKVYHPDQPLPLSDVLPILERLGLRVVDE
IPYRVRPGNKDENGAPETVVMIHDFGLEAHGGAGVLKDVRQPFHDAFRRVWEGDMESDGF
NALILKTGMSWRQVTFLRAMAKYLRQTGITFSQEYMERTLVNNSDIAVHIVAMFEARFKP
QKAKDALARANRHGGQIRANILGTLELVSSADEDRILRRYVNLVDAMVRTNYFQIDADRE
ARPYMSFKFSSADLEELPLPRPFREIFVYSPRVEGVHLRFGLVARGGLRWSDRREDFRTE
VLGLVKAQQVKNAVIVPVGSKGGFFVKRPPVSGDREAQLAEGIACYKTFIRGLLDLTDNL
DRQGKIIPPTQMMRYDGDDPYLVVAADKGTATFSDIANGVSEEYGFWLGDAFASGGSQGY
DHKKMGITARGGWESVKRHFREMGIDCQKQAFTAIGVGDMSGDVFGNGMLLSPYTRLQAA
FNHMHIFIDPNPDPKASFKERKRLFALARSGWSDYKTAAISGGGGIFERRAKSIQLSPEM
KKMFAVTADKVTPNELIKMILRLDVDLLWFGGIGTYVKAGRESHADTGDRGNDAIRVDAT
EVRARIVGEGANLGLTQNARVEYALNGGRLNADSIDNSAGVDCSDHEVNIKILLDRVVAD
GKLSKKARNALLAKMTDEVGALVLRDNYLQTQAITLVQTQGTEILDHQMRLMRMLEKAGR
LNRTVEYLPDDETLNERALVGKGLTRPEVSVLMSYSKIWLYDELLASDVPEDKYLADDLV
RYFPTPLQGAYANDIAKHRLRREIIATRVTNSMINRVGGTFVTQLMEKTGMPAADIARAY
AITREVFALREIWEKIETLDNKVPAHTQTSMLQDINRLTDRVTLWFLRHGVHPLDIAHYV
DQFSRGTATLKKGLAGVLPQTYFDDLHKRAQVYIGDGVPKDLALTVAGLVNMVGAPDVVR
LAEAHKIDVCKMAKLFYKVGARFRLGRLRAACESLESQSHWQKLAIAALLEELYAHQVAL
ASQVLAMGGADLSKALEIWSVKNKVAIDRTEQLLSELWAGDVNDVSMVAVASRSLRALAE
SVPA
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgagttggagcgcaaggccgcgcgtattggcgaggccgtgaccatcgcccgc
aaagggcttaagggagacgccggggacttggcggaaagatttctgcggggttactacgca
cacgttccccccgaggacgttatcgccttcaggcccgaacggctggccggcgcggccggc
gcgcaccgcgccatggggtcggtgcgccagcgcggaaaaccgaaaattcgcgtttacaat
cccagcgtgagtcagcatggatggcggatcagccataccgtcatcgaaattgttaccgac
gatatgccgtttttggtcgattcggtcacgtcggaattaaaccgcaggggtttgaacgtg
ctgttgacgttgcatccaattttgcgggtgcgacgcgatgcgcggggacggatgctcgac
gttctcgataccggcgttttgggcgccgacgatggggttttcaacgaatcgttcatgcac
atgcagatcgcggccattcccaaaacgctgttcagggaaatcgagcgggcgatcgcggac
gtcatcggcgatgtcgtggccgcggtcgagggctggcaaccgatgcgcctgcgcctggga
gagttgatcgacgaactggaatccctgcccatcggggtatccctggatgaaatcagcgag
gttcgcgatttcctgcgctggctatacgaagaccatttcacttttctcgggtatcgcgag
tacaccttcagcggcaccgacgacacggcgaaagtctcgattaacaaaggcagcggtctg
ggcgtactgcgcaaccccgacaagatcgtctttcaagagctccacgagttggcgtcattg
ccgcccgaagtccacgattttgtccatcgccccgaccttctcatggtcaacaaaacaaat
accctgtccaccgtgcatcgtccggtgcacatggattcggtcggcattaaacgtcttgac
gcccagggcaaggtggtcggcgaacgggtttttgtcggtctgttcacggcgtcggcctat
acccgcagcctgagggacatccccctgcttcgtcgcaagatgtcgcggactttcgatcgc
gccgggctgcccgcatcgagccacgacggtaaggcgctgctgaatatcctcgaaacctat
ccccgcgatgaattgtttcagatttcggaagataccctgctcgacatcgcccttggaatc
ttgcacctgcaagatcgtcagcgggtggcgcttttcctgcgtaaggacgatttcgagcgg
ttcatttcatgcctgatctacattccccgcgaccgctatacgacggacttgcgcatgcgt
atgcaagcggttctcgaagacgctttcgccggtaaggtgacgtctcactccgcccaactg
ggatcgaccgccttggcgcgcctgcacgtcatcgtcgaaacgacgccgggcgcgattccc
gaattcaatgttgatgtcctcgaaaagaaactgatcgacaccgcgcgatcgtggtcggac
agcatgctcaacgttctgatcggatgttgcgacgaacaggaaggaacgcgccttttccac
cgctaccaaaaggcctttccggcggggtaccgcgaacgttacgacgtcgccgactcgctg
gaagatattcttcatgtcgaagaaacgagccaggaaaatcgtctgaacatgaacctttac
caggatggcgatggcgccgatgggcggttccgcttcaaggtttatcatcccgatcaaccg
ttaccgctatccgacgtcctgccgatcctagaaagattgggtcttcgggtggtggacgaa
attccctaccgcgtccgtccgggcaacaaggatgaaaacggcgcgccggaaaccgtcgtg
atgattcacgacttcggcctcgaagcccacggcggcgcgggcgtcctaaaggacgtgcgc
caaccttttcacgacgcctttcgccgggtatgggaaggcgacatggagagcgacggcttt
aacgccttgatcctgaaaacgggcatgtcatggcgtcaagttacgtttctacgcgccatg
gccaaatatctgcgccagaccggcattaccttttcccaggaatacatggaacgcacgctg
gtcaacaacagcgatatcgcggtccatatcgtggccatgttcgaggcccgcttcaagccg
caaaaagccaaggacgctttggcccgcgccaaccgtcatggcgggcaaatccgcgccaat
atcctcggcaccttggagttggtgagtagcgccgatgaggatcgtattttacggcgctac
gtcaatctggtggacgccatggtccgtacgaattacttccagatcgacgccgaccgagag
gcgaggccctacatgtcgtttaagttttcgagcgccgatctcgaagagttgccgttgcct
cgaccgtttcgtgaaattttcgtttacagtccgcgagtcgaaggcgtgcacctgcgtttc
ggcctggttgcgcgcggcggtttgcgctggtccgaccggcgcgaggattttcgtacagag
gttcttggcctggtcaaggcgcaacaggtcaagaacgcggtgatcgttccggtcggttcg
aagggcggctttttcgtcaagcgcccgccggtgagcggcgatcgcgaagcccagctggcg
gaaggtattgcatgctataaaacctttatccgcggattgctggatttgaccgacaatctc
gatcggcaaggcaagatcattcccccaacccagatgatgcgctacgacggcgacgatccc
tatttggtggtcgccgccgacaaggggacggcgaccttctcggacatcgccaacggcgtt
tccgaggaatacggcttctggttgggcgacgccttcgcctcgggcggcagccaggggtac
gaccacaaaaaaatgggcattaccgcccgtggcgggtgggaatcggtcaagcgtcacttt
cgcgagatggggatcgactgccagaaacaggccttcaccgcgatcggcgtcggcgatatg
tcgggtgacgttttcggcaacggcatgttgctgtcgccctatacccgccttcaggcggcc
tttaaccacatgcacatctttattgatcccaatcccgatccgaaggcgagcttcaaggaa
cgcaagcggctattcgccctggcgcgttcgggctggagcgattacaagacggcggcgatt
tccggcggaggcggcatcttcgagcgccgggcgaaatcgatccaattgagtcccgagatg
aaaaaaatgttcgcggttaccgccgacaaggtgacgccgaacgagctcattaaaatgatc
ctgaggctagacgtcgatttgctgtggttcggcggcatcgggacctacgtcaaagccggc
cgcgaaagccacgccgacaccggcgaccgggggaacgacgcgattcgcgttgacgccacc
gaagtgcgcgcccgcatcgtcggcgagggcgccaacctgggcctgacgcaaaacgcccgc
gtcgagtacgcgctaaacggtgggcggctgaatgccgattcgatcgacaattcggcgggg
gtcgattgttccgaccatgaggtcaacatcaaaatcttgcttgatcgcgtcgtggctgac
gggaagttgtccaagaaggcgcgcaatgccctgctggcgaagatgaccgacgaagtcggc
gcgttggtcctacgcgacaattatctgcaaacccaggcgattaccctggtgcagacccag
ggaacggaaatcctggaccatcagatgcgcctgatgcggatgttggaaaaggcggggcgg
ttgaaccgcaccgtggaatacctgcccgatgatgaaactctgaacgagcgggcgcttgtc
ggcaaggggctaacccgacccgaggtttcggtcttgatgtcgtatagcaaaatttggctg
tatgacgaattgctggcctccgacgtgccggaggataaatatctcgccgatgatttggtg
cgttattttccgacaccgttgcaaggcgcgtacgccaacgatatcgccaaacaccgcttg
cgccgcgagatcatcgccacccgggtcaccaattcgatgatcaatcgcgtcggcggcacg
tttgtcacccagctaatggagaaaaccgggatgccggcggcggacatcgcccgcgcctac
gcgatcacgcgcgaggtgttcgccctcagggaaatctgggagaagatcgaaacgttggac
aacaaggttccggcgcatacccagacctccatgctgcaagatatcaaccggctgaccgat
cgggtcacgctttggttcctgcgccatggcgtgcatccattggatatcgcccattacgtg
gatcagttctctcggggaacggcgaccctgaagaaggggctggccggcgtcctgccgcaa
acctatttcgacgatctgcacaaacgggcccaggtctatatcggcgacggcgtgcccaag
gatcttgccctgacggttgcgggcttggtcaatatggtcggtgcgcccgacgtggtgcgc
ttggccgaggctcacaagatcgacgtctgcaagatggccaagttgttttataaggttggc
gcgcggtttcgcctgggtcgcctgcgcgcggcctgcgaatccctggaatcgcaaagccac
tggcaaaaattggcgatcgccgccctgcttgaggaactctacgcccatcaggtcgccctg
gcatcccaggtcttggcgatgggcggcgcggacctgtccaaggcccttgagatctggtcg
gtcaagaacaaagtggcgatcgaccgcacggaacagttgctcagcgaactttgggccggc
gacgttaacgatgtttcgatggttgcggtggccagccgttccctgcgtgccttggccgag
agcgtgcccgcttaa
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