Vibrio syngnathi: K08M4_15660
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Entry
K08M4_15660 CDS
T09193
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00220
Arginine biosynthesis
vsy00250
Alanine, aspartate and glutamate metabolism
vsy00430
Taurine and hypotaurine metabolism
vsy00910
Nitrogen metabolism
vsy01100
Metabolic pathways
vsy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
K08M4_15660 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
K08M4_15660 (gdhB)
00220 Arginine biosynthesis
K08M4_15660 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
K08M4_15660 (gdhB)
Enzymes [BR:
vsy01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
K08M4_15660 (gdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
Holin_BhlA
DUF3730
Motif
Other DBs
NCBI-ProteinID:
ARP38321
UniProt:
A0AA34TNT5
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All DBs
Position
1:complement(1666596..1671437)
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AA seq
1613 aa
AA seq
DB search
MTARETVVPVLLEKVYKLIQDKLDLAHRPLVTQLAQHLFSNVSHDDLTQRNESDLYGAVV
SLWHHINEKKADQISVRVFNPTVSRQGWQSTHTIVEIVVPDSPFLVDSVKMALTRLDLSS
HLMLHNPTQISRSDKGSVVGVSNNEGAFQSLFHIEVDRLSSKAEMTALKTELLDIFTDTG
LVVNDWLKMVEKLEQVTNQVEKQKESIPVDGQRFDETLAFLRWLGEHNFTFMGYKEYDLV
SVNGDTELQPTKEQGLGLFANSDRVRNVKLSEFSDSARLEAKKPYVLIVTKGNTASRIHR
PAYNDYIGIKKFDKNGKVIGEHRFTGLYTSAVYNQTVESIPLVREKVERILDASGYREGS
YSYKALHNILENYPRDELLQAREEELLEVGTGVVQMQDRDLLRLFVRKDPFGRFFSCMVY
VTKDRYNTELRRQTQRILKQYFGCEQEVEFTTYFSESPLARTHYIVRVDNNNMDVDVKTI
EQNLMEVSSTWDDRLSESIVANFGESKGLPLSKEYMRAFPRSYKEDMMPGSAVADIERLE
ALSEDNKLGMLFYRPQEEATDSKAVRLKLFYHSDEPIHLSDVMPMLENFGLRVIGESPYE
VRKTNGVTYWILDFSMLHKSDKTIDLREARDLFQQAFAAIWEGELDSDGFNRLVLGAGLS
GREISILRAYARYMRQVGFPFSQQYIEDTLSHYPDLAKGLVSLFGKRFDPKLKGSAKGQQ
DLIKKITEQLDHVESLDDDRIIRRYMEMITATLRTNYYQLDDNKQSKPWLALKMRPSEIP
DIPAPVPAFEIFVYAPDIEGVHLRGGKVARGGLRWSDRQEDFRTEILGLVKAQQVKNTVI
VPVGAKGGFVCKRQHTMSGRDEIFAEGQRCYKRFIRALLDVSDNIIEGEVIPPKSVVRHD
EDDPYLVVAADKGTATFSDLANSVSAEYNFWLGDAFASGGSNGYDHKAMGITAKGGWESV
KRHFREMGINCQTTDFTAIGVGDMAGDVFGNGMLLSKHIRMQAAFNHMHIFIDPNPESAS
SWVERERLFNLPRSSWEDYNKDLISQGGGIFSRRAKSISLTPEIQKMLGTKKASMAPNDL
IKAILSMQVDLLWNGGIGTYVKSSNETHTDVGDRANDVLRIDGRDLKAKVVGEGGNLGMT
QLGRIEYALTGGRVNTDFVDNVGGVDCSDNEVNIKIFLNGLVSNGDLTVKQRNQVLESME
DEVGEIVLDDAYCQAESISVTEHQGVGLVKEQIRFIHTMEKAGYLDRGLEYIPDDETLLE
REKQGQGLTRPELSVLVAYGKMVLKEDLVSDDIANDEFHAQQLMQYFPTALRRNYSQHMD
NHPLRSEIIATALANQMVNEMGCNFVTRLQEETGANIVDIANAYAASREIYGLGHVLKSI
RELDNVSSSEAQYELIYHVRRTLRRLARWLLRNRTGKQSVKALIELYQGDVLTITEKLDE
NLVASEVEEHNAMAQLWIDQGVNAELANSVARLSSLYSALDISTVARETGKTVQQASKLY
FNLGDRLSLHWFLKQINGQAVDNNWQALARAAFREDLDWQQRQLTGQVLNCGCASDIDVI
KALDDWMESNSVSLHRWESILNEFKVGSVHEFAKFSVALRELMLLNLNCMSTD
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacgtgaaactgtggttccagttttacttgaaaaagtgtacaaactgattcaa
gacaaacttgaccttgctcatcgacctctcgtaactcaacttgctcaacacttgtttagt
aatgtttctcacgacgatttaactcagagaaacgaatccgatttatacggtgctgtagtt
agcttatggcatcacatcaatgaaaagaaagctgaccaaatctctgttcgtgtttttaac
ccgacagtaagtcgtcaaggttggcaatctactcacactatcgttgagatagtcgtacca
gatagcccattccttgtagactctgtaaaaatggcgctgactcgcctagacctttcttct
caccttatgcttcacaatccaacacaaatctctcgctctgataagggcagtgttgtcggc
gttagcaataacgaaggtgcattccaatcgcttttccatatcgaagtagaccgtcttagc
agcaaagctgaaatgacagcgctcaaaacggaactactggatatctttaccgatactggt
ttagtcgtgaacgattggctgaagatggttgaaaaacttgagcaagtaacgaatcaagtt
gaaaagcaaaaagagagcattcctgtagacggccaacgctttgatgagacgttggcgttt
cttcgttggttaggcgagcacaactttacgtttatgggctacaaggaatatgaccttgtt
tctgtaaatggcgacacagaactacaaccgaccaaggagcaaggtcttggtttgtttgcg
aattcagatcgtgtgcgtaacgttaagctgtctgagttttcggattcggcacgtcttgaa
gcaaaaaaaccgtatgtacttatcgtaaccaagggcaacacggcttcacgcattcaccgc
ccagcttacaacgattacatcggtattaagaaatttgataagaacggtaaggtcattggt
gagcaccgctttactggtctttacacttctgccgtttataaccaaaccgttgaaagcatt
cctcttgttcgcgagaaagtagagcgtatcttagatgcgagtggttaccgtgagggttca
tactcttacaaagcactgcacaatattctagaaaactatccgcgtgatgaactgcttcaa
gctcgagaagaagagctactagaagtcggtaccggtgtcgtacaaatgcaagatcgcgat
cttctgcgcttgtttgtacgcaaagacccgtttggccgtttctttagttgcatggtttac
gtaaccaaagatcgttacaacaccgagcttcgccgtcaaacacaacgcatcttgaagcag
tactttggttgtgagcaggaagtggaattcacaacatacttctctgaaagcccgctagca
agaacgcactatattgttcgtgttgataacaacaacatggatgtggacgtgaaaacaatt
gagcaaaatttaatggaagtatcgtctacgtgggatgaccgcctatctgaatcaatcgtt
gctaacttcggtgagagcaaaggtcttccgttatcgaaagagtacatgcgtgcattccca
cgttcgtacaaagaagacatgatgcctggttctgctgttgcagacattgagcgtctagaa
gcactaagtgaagacaacaaacttggcatgcttttctaccgtcctcaagaagaggctacc
gactctaaagccgttcgtttgaagctgttctaccacagtgatgagccaatccacctgtct
gatgtgatgccaatgcttgaaaactttggcttgcgcgttattggtgaatcaccttatgaa
gtgcgtaaaaccaacggggtgacttattggatccttgatttctcgatgctgcataagagt
gataagacgattgatcttcgtgaagctcgcgatcttttccaacaagcctttgcggcaatt
tgggagggtgagttagacagcgatggtttcaaccgcttggtattgggtgcgggtctttct
ggtcgtgaaatctcaatcttacgtgcgtatgcgcgttacatgcgtcaagtgggtttccca
ttcagccaacaatacattgaagacacattgtctcattacccagatctagcgaaagggtta
gtgagtttattcggcaagcgttttgaccctaaattgaaaggcagcgcgaaaggccaacaa
gatcttattaagaagatcactgaacagttggatcatgtagaaagcttggatgatgatcgt
atcattcgtcgttacatggaaatgatcacagcaacgcttcgtactaactactatcagtta
gacgacaacaaacaatctaaaccttggttggctctgaaaatgagaccaagcgagatccca
gatatcccagcgccggttcctgcgtttgagattttcgtttacgcaccagacattgaaggt
gtgcatctacgtggcggtaaagtcgctcgtggtggtttacgttggtcagaccgtcaagag
gatttccgtactgagattctaggcctagttaaagcacagcaagttaagaacacagtcatt
gtaccggttggtgcaaaaggtggtttcgtttgtaagcgtcagcacactatgtctggccga
gacgagatcttcgctgaaggtcaacgttgttacaagcgcttcatccgtgcactactagac
gtatcagacaacatcattgaaggtgaggttatcccacctaagagtgttgttcgtcacgat
gaagatgatccgtacttggttgttgctgccgataaaggtaccgcaacgttctcagatctc
gcaaactcagtatctgctgaatacaacttctggttaggcgatgcgtttgcctctggtggt
tctaacggttacgaccataaagccatgggtatcacggcgaaaggtggttgggaatctgtt
aaacgtcacttccgtgaaatgggcatcaactgtcaaacaacggacttcaccgctatcggt
gtcggtgatatggcgggcgatgtgtttggtaacggcatgctgttgtctaagcatattcgt
atgcaagccgcgtttaaccacatgcatatcttcatcgatccgaatccagagtcagcatca
agctgggtagagcgtgagcgcttgtttaatctgcctcgctcaagctgggaagattacaat
aaagaccttatttctcaaggtggtggcatcttctctcgtcgagcgaagtctatctctttg
acgcctgaaattcagaaaatgctgggtactaagaaagcatcaatggcaccgaatgacttg
atcaaagcgatcttgtctatgcaggttgatcttctttggaatggcggtatcggtacttac
gttaagtcttcaaacgagactcatacagatgttggtgaccgtgcaaatgacgtgcttcgt
atcgatggccgtgacctaaaagctaaggttgttggtgaaggcggtaacttgggcatgact
caactgggtcgtattgaatacgcgctaacgggtggccgcgttaatactgatttcgttgat
aacgttggtggtgttgactgttcagataatgaagtaaacattaagatcttcttgaatggt
ttggtgtctaatggtgatctaaccgttaaacaacgtaaccaagtgcttgaatcgatggaa
gatgaagtgggcgaaatcgtactagacgatgcatattgccaagctgagtctatttcggtt
actgagcatcaaggtgttggcttagtaaaagagcaaatccgctttattcatacaatggaa
aaagcagggtacttggatcgtggtttggaatacatccctgatgacgaaacactgcttgag
cgtgaaaagcagggccaaggcctaacaagacctgagctttctgtacttgtcgcttacgga
aaaatggtgcttaaagaagatcttgttagtgatgatatcgctaatgatgaattccatgct
caacagcttatgcagtacttcccaactgcgttacgtcgtaactactctcagcacatggac
aatcatccactacgttctgaaatcattgcgacggcactggctaaccaaatggttaacgag
atgggttgtaacttcgttactcgtctgcaagaagagacgggcgcaaatattgttgatatt
gccaatgcttacgcagcatcacgtgaaatctacggtcttggccatgttctgaagagcatt
cgtgaactggacaatgtttcaagctctgaagctcaatatgaattgatctaccatgttcgc
cgtacacttcgtcgtttggctcgttggttgctaagaaaccgtaccggtaaacagtcagtg
aaagcattgattgaactttaccaaggtgatgttcttactatcacagagaaactggatgaa
aatctagtggcttctgaagtagaagagcataacgcaatggcacagttatggattgaccaa
ggcgtaaacgctgagttggctaattcagttgcgcgtttgtctagcttgtactcagcactg
gatatatccacagtggctcgtgagacgggtaaaacagtacaacaagcgtctaagctttac
ttcaatcttggtgatcgtttatctctgcactggttcttgaagcaaatcaatggtcaagct
gtagataacaactggcaagcgctggctcgtgcagcatttagagaagatctggattggcag
caacgtcagctaactgggcaagtgcttaactgcggttgtgcttcagacatcgatgtgatt
aaagcgcttgatgattggatggaaagtaactctgtttctctacatcgttgggaaagtatc
ttgaacgaattcaaagtgggttcggttcatgagtttgccaagttctcagtagcactgcgt
gaattgatgttattgaatctaaactgcatgtcgacagattag
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