Vibrio syngnathi: K08M4_15990
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Entry
K08M4_15990 CDS
T09193
Name
(GenBank) radical SAM domain-containing protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00790
Folate biosynthesis
vsy01100
Metabolic pathways
Module
vsy_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
K08M4_15990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsy03016
]
K08M4_15990
Enzymes [BR:
vsy01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
K08M4_15990
Transfer RNA biogenesis [BR:
vsy03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
K08M4_15990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
AAA_9
Motif
Other DBs
NCBI-ProteinID:
ARP38354
UniProt:
A0AA34TP33
LinkDB
All DBs
Position
1:complement(1730616..1731284)
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AA seq
222 aa
AA seq
DB search
MYKINEMFETIQGEGVFTGVPAVFVRLQICPVGCSWCDTKQTWEALPEDETSLGDIMVKT
EDSPTWSAIDAQGIVNEYIKQGYTAKHIVITGGEPCIYDLVPLTEAFEQHGCRCQIETSG
TSEVKATLGTWVTVSPKVAMKAKLDILDSALVRANEIKHPVGTGKDIEQLDALIARADVP
ENTVIALQPISQKERATQLCIDTCIERNWRLSIQTHKYLSIA
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
ttgtacaagattaatgaaatgtttgaaaccatccagggcgagggcgtatttaccggcgtt
cctgctgtttttgttcgactgcaaatttgccctgtaggctgttcttggtgtgataccaaa
cagacttgggaagcgttgccggaagatgaaacgagccttggtgatattatggttaagaca
gaggattcaccgacttggtctgcaattgatgcgcaaggaatcgtgaatgaatacatcaag
caaggttacaccgctaagcacattgtgattaccggtggtgagccgtgcatctatgatctt
gtccctcttactgaagcatttgagcagcacggttgtcgctgtcagattgagaccagcgga
acatcggaagtaaaagccacactgggtacttgggttacggtgtcaccaaaagtcgcaatg
aaagccaaattggatatccttgatagcgcactcgttcgtgcgaatgaaatcaagcaccct
gttggtacaggtaaagatatcgagcaactagatgctcttattgctagagccgatgttcct
gaaaatacagtcattgcacttcaacctattagccaaaaagaacgtgcaacgcaactgtgt
attgatacctgtattgaacgtaactggcgtttatctattcaaactcacaaatatttgagc
atcgcatag
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