Vibrio syngnathi: K08M4_26490
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Entry
K08M4_26490 CDS
T09193
Symbol
metH
Name
(GenBank) Methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00270
Cysteine and methionine metabolism
vsy00450
Selenocompound metabolism
vsy00670
One carbon pool by folate
vsy01100
Metabolic pathways
vsy01110
Biosynthesis of secondary metabolites
vsy01230
Biosynthesis of amino acids
vsy04981
Folate transport and metabolism
Module
vsy_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
K08M4_26490 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
K08M4_26490 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
K08M4_26490 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
K08M4_26490 (metH)
04980 Cobalamin transport and metabolism
K08M4_26490 (metH)
Enzymes [BR:
vsy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
K08M4_26490 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ARP39375
UniProt:
A0AA34TQY6
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All DBs
Position
1:complement(2936104..2939781)
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AA seq
1225 aa
AA seq
DB search
MGSNVRQKIDALLKQRILLIDGGMGTMIQDYKLEEQDYRGERFADWHSDLKGNNDLLVLS
QPKLIKDIHMEYLEAGADILETNTFNATTIAMADYDMESLSEEINFTAAKLAREAADEWT
AKTPDKPRFVAGVLGPTNRTCSISPDVNDPGYRNVSFDELVEAYSESTRALIKGGSDLIL
IETIFDTLNAKACSFAVESVFEEVGITLPVMISGTITDASGRTLSGQTTEAFYNALRHVK
PISFGLNCALGPDELREYVGEMSRISECNVSAHPNAGLPNAFGEYDLSPEDMAEHVKEWA
ESGFLNLIGGCCGTTPEHIRHMAEAVEGVTPRQLPDLPVSCRLSGLEPLTIAKESLFVNV
GERTNVTGSARFKRLIKEELYDEALSVAREQVENGAQIIDINMDEGMLDAEACMVKFLNL
CASEPEISKVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFVEQAKLVRRYGAA
VIVMAFDELGQADTRERKVEICTNAYNILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYA
VDFIEAVGDIKRDLPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKNGMDMGIVNA
GQLEIYDNVPEDLREAVEDVVLNRRDDSTERLLDIATEYLERAVGKVEDKSALEWRTWPV
EKRLEHSLVKGITDFIVEDTEEARVNASRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVV
KSARVMKQAVAHLEPFINATKDVGATNGKILLATVKGDVHDIGKNIVGVVLQCNNYEIID
LGVMVSCEKILKVAKEENVDIIGLSGLITPSLDEMVHVAKEMERQGFKLPLLIGGATTSK
AHTAVKIEQNYSEPVVYVNNASRAVGVCTSLLSNELKPAFVEKLDIDYDRVRDQHNRKKP
RTKPVTLERARANKVAIDWNAYTPPAPAKPGVHIFNDFDVATLRQYIDWTPFFMTWSLVG
KYPAILNHEEVGDEAKRLFKDANDLLDRVEREKLLEARGMCAMFPANSVGDDIEVYTDES
RTEVLKVLHNLRQQTEKPKGFNYCLSDYIAPKDSGKADWIGGFAVTGGIGERELADDYKA
KGDDYNAIMIQAVADRLAEAFAEYLHKEVRKDIWGYSPDEDLSNDDLIREKYQGIRPAPG
YPACPEHTEKGTLWELMDVEKAIDMSLTTSYAMWPGASVSGMYFSHPDARYFAIAQIQQD
QVDSYADRKGWGMLEAEKWLGPNIN
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
gtgggaagtaatgtaaggcaaaagattgacgctctgttgaagcaacgaattttactgatt
gatggtggcatgggcaccatgattcaggattataaattggaagagcaagactatcgtggt
gagcgatttgctgattggcatagtgacttaaaaggtaacaatgaccttttggtactttct
cagcctaagcttatcaaagatatccatatggagtatttagaagccggtgctgatatcctc
gagaccaatacctttaatgctacaaccattgctatggctgactacgatatggaaagcctt
agcgaagaaattaactttacagctgcaaaattagctcgtgaagcggcagacgaatggacg
gcaaagaccccagacaaaccccgtttcgtagcgggtgtgttaggtccaactaaccgaacg
tgttctatctccccagacgttaatgatccgggctatcgtaatgttagctttgatgagctt
gttgaagcttactccgaatcgacacgagcacttatcaaaggcggctcagatcttattctt
atcgagactatcttcgacacgttaaatgcaaaagcatgttcttttgcggttgaatctgtt
tttgaagaggtaggcatcacgcttcctgtgatgatctccggtaccattactgacgcttca
ggtcgtacgctttcagggcagacaacagaagccttctataacgcccttcgtcatgttaaa
cctatctcatttggattgaactgtgcattaggtcctgacgaattgcgagagtacgttggt
gagatgtctcgtatctcagaatgtaacgtttccgcccaccctaacgcgggtttacctaat
gcgttcggtgagtatgacctttctcctgaagatatggctgaacacgttaaggaatgggcc
gagagtggcttcttgaacctaattggtggttgttgtggtacgacgccagaacatatacgt
cacatggctgaggccgttgaaggcgtaacgccacgtcaattacctgatttgcccgtttct
tgtcgcctttctggcctagaaccactgacgatagctaaagaatcgctattcgtgaatgtg
ggtgagcgtactaacgttaccggttctgctcggtttaagcgattgattaaagaagagctc
tacgacgaagctttgagtgttgctcgagagcaagttgagaacggtgctcagattatcgat
atcaacatggatgaagggatgctagacgctgaggcgtgtatggttaaattccttaatcta
tgtgcgtctgagccagagatctcgaaagtaccagtcatggtcgactcttcaaaatgggaa
gttatcgaagcaggtctgaaatgtattcagggtaaaggtatcgttaactcgatctcattg
aaggaagggaaagagaagtttgtcgagcaagctaaattagttcgtcgttatggtgcagca
gtcattgtgatggcattcgatgaactagggcaggctgatactcgagagcgcaaagtcgag
atctgtactaatgcctacaatattcttgttgatgaagttggtttcccgccagaagatatt
atttttgacccgaacattttcgctgtggctactggtattgatgagcataacaactatgcg
gtcgatttcattgaagcggtaggggacatcaaacgcgatcttcctcatgcgatgatctcg
ggtggtgtgtcgaatgtttcgttctctttccgcggtaataactacgttcgtgaggcaatc
cacgcagtattcctatatcactgttttaaaaacggtatggatatgggcatcgtgaatgct
gggcaattagagatttacgataatgtgcctgaggatttacgtgaagccgttgaagatgtg
gttctaaaccgccgagatgattctactgagcgcttgctcgatatcgcgactgaatatcta
gagcgtgcagtcggcaaagtggaagataaatcggctttagagtggcgcacctggccagta
gaaaagcgcttagagcactctttggtgaaaggcattactgatttcatcgttgaagatacc
gaggaagctcgtgttaatgcctctcgtcctatcgaggtgattgaaggtccattaatggat
ggcatgaacgtagttggtgacctctttggtgaaggtaagatgttccttcctcaagtggtg
aaatctgcccgtgttatgaagcaagcggtagcccatctagagccatttattaatgcaacc
aaagacgttggtgcaactaacggaaaaattttactggcgaccgtaaaaggcgatgttcac
gatattggtaaaaacattgtgggcgttgtcttgcagtgtaataactacgaaattatcgat
ctgggcgtgatggtttcatgtgaaaaaatccttaaggtagccaaagaagaaaacgtcgat
atcattggtctttcgggtttaatcactccttcattggatgagatggttcatgtggctaaa
gagatggagagacaagggtttaaactgcctcttctgattggcggagcaaccacatctaaa
gcgcatactgctgttaagattgaacagaattactctgagcctgtggtctacgtaaacaat
gcttcacgggcagtgggtgtgtgtacttcattgctatctaacgagctgaaacctgcattt
gtcgagaaattggatattgattacgatcgcgttcgcgatcaacacaatcgtaagaagcct
cgaactaagcctgtcacgcttgaaagagctagagctaataaagttgctatcgattggaat
gcgtacactccccctgcacctgctaagccgggagtacatattttcaatgattttgatgta
gcgactttgcgccagtatatcgattggactccattctttatgacatggtcattggtcgga
aagtatccagcaattcttaatcatgaagaggtaggtgatgaagcgaagcgcctcttcaag
gatgctaacgatttactcgaccgtgtagagagagagaaattgcttgaagctcgcggtatg
tgtgccatgttccctgctaacagtgttggcgatgatattgaagtgtataccgatgaatcg
cgtactgaagtattaaaggttctgcacaaccttcgtcagcaaaccgaaaagccaaaagga
tttaactactgtttgtcagattacattgcgccaaaagacagcggtaaagcggattggatt
ggtggttttgcagtgaccggtggtattggtgagcgagagctagctgatgattacaaagcg
aaaggcgacgactataatgcgatcatgattcaggcggttgcagaccgattggctgaagcg
ttcgctgaatacttgcataaagaagtgagaaaggacatttggggctactcgccagatgaa
gatttgtctaacgacgacttgattcgcgagaagtaccaaggtattcgtccagccccaggt
taccctgcttgcccagagcatacagagaaaggcacgttgtgggagttaatggacgttgaa
aaagcaatcgacatgtcactaaccacgagttacgcaatgtggccaggtgcctcagtgtct
ggtatgtatttctcacatcctgatgcccgatactttgctattgcacagattcaacaggat
caagtggatagctatgccgaccgtaaaggttggggtatgttggaagctgagaagtggtta
ggtccaaacattaactag
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