Vibrio syngnathi: K08M4_40450
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Entry
K08M4_40450 CDS
T09193
Symbol
bepF_2
Name
(GenBank) Efflux pump periplasmic linker BepF
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vsy
Vibrio syngnathi
Pathway
vsy01501
beta-Lactam resistance
vsy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K08M4_40450 (bepF_2)
01503 Cationic antimicrobial peptide (CAMP) resistance
K08M4_40450 (bepF_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vsy03036
]
K08M4_40450 (bepF_2)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsy02000
]
K08M4_40450 (bepF_2)
01504 Antimicrobial resistance genes [BR:
vsy01504
]
K08M4_40450 (bepF_2)
Chromosome and associated proteins [BR:
vsy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
K08M4_40450 (bepF_2)
Transporters [BR:
vsy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K08M4_40450 (bepF_2)
Antimicrobial resistance genes [BR:
vsy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K08M4_40450 (bepF_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
YknX_C
BSH_CzcB
HH_EMRA
HH_YBHG
BSH_CusB
BSH_YhbJ
Biotin_lipoyl
Beta-barrel_RND_2
HH_AAEA_pHBA
Peptidase_M23
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
ARP40706
UniProt:
A0AA34TT89
LinkDB
All DBs
Position
2:complement(1219143..1220339)
Genome browser
AA seq
398 aa
AA seq
DB search
MTDVLRKFYTVQILTSDGITMRKKLILTALASSLILAGCGQDAQNAKQAPLPLVAVQDVS
VVSHQQSKSYIGRIEAVEDTAITAQVSGYLQSRHFNEGQMVEKGQLLYSIEPSSFEAEVA
SAKASVAQANANLKKAELDFNRGKNLLPKGSISQSEFDALTANLLGSQAQLEASQAQLNA
ANVQLSHTKIIAPFSGRISDTKVSTGDLVSPSSGVLTTLVSLDPIHASFSISERERIELG
MDRIEGDGSSDSAGVEVQIMLENGEAFEHLGQLDFLGNRINLNTGTIAMRAIADNPNQQL
LPGQHVRVDLREKQSIDVVTIPRRAVQTDLEGDFVMVLVEGEAAPVAERRNIVMGRQVEG
GVIVQSGLEKDDAVITQGLQRVRNGMSVRIQASAEQAE
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgacggatgtgttacgtaaattttatactgttcaaatactaacaagtgacggtataacc
atgcgtaaaaagttgatccttacggctcttgcaagctctcttattcttgctggatgtggg
caagatgctcaaaatgccaagcaagcgcctctacctctcgtagctgtacaggatgttagc
gttgtttctcaccagcaaagtaagtcgtacatcggtcgtattgaagccgttgaagacacg
gctatcacagcgcaagtttcgggctatctgcaaagccgtcatttcaatgaaggtcaaatg
gtcgaaaagggtcaattgctttactcaattgagccatcctcatttgaagctgaagtagca
agcgcaaaagcgtcggttgctcaagcgaatgccaaccttaaaaaagccgaacttgatttt
aatcgtggtaagaatcttctccctaagggcagcatttctcaatcggaatttgatgcattg
acggcaaacttactcggttctcaagcacagcttgaagcaagccaagctcagctaaatgca
gccaacgttcagctttctcataccaaaattattgcccctttttctggaagaatcagcgac
accaaagtgagtacgggtgatctggtttcaccgtcttcaggtgtattaactacgttggtt
agcctagacccaatccatgcttcgtttagtatcagcgagcgcgagcggattgaattaggt
atggatcgtattgaaggtgacggcagcagcgactctgcaggtgttgaagttcagatcatg
cttgaaaatggcgaagcgttcgaacatcttggccagctcgatttcttgggtaaccgcatc
aaccttaatacaggtacgatcgcaatgcgtgcgattgccgacaacccaaatcaacaactg
cttccgggtcaacacgttcgcgtggatctacgtgaaaagcaatctattgatgttgtgact
attccgcgccgtgcagttcaaaccgacctagaaggtgactttgtgatggtattggttgaa
ggtgaagccgcccccgttgctgaacgcagaaacatcgtgatggggcgtcaggttgaaggt
ggtgtgattgttcaatctggattagagaaggacgacgcggtgatcactcaaggcctacag
cgtgtacgtaatggtatgtctgttcgtattcaagcttctgctgaacaagctgagtaa
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