Vibrio tapetis subsp. tapetis: A0608
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Entry
A0608 CDS
T05424
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta00220
Arginine biosynthesis
vta00250
Alanine, aspartate and glutamate metabolism
vta00430
Taurine and hypotaurine metabolism
vta00910
Nitrogen metabolism
vta01100
Metabolic pathways
vta01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
A0608 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A0608 (gdhB)
00220 Arginine biosynthesis
A0608 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
A0608 (gdhB)
Enzymes [BR:
vta01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
A0608 (gdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
Holin_BhlA
Motif
Other DBs
NCBI-ProteinID:
SON48587
UniProt:
A0A2N8Z9M5
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All DBs
Position
A:621895..626826
Genome browser
AA seq
1643 aa
AA seq
DB search
MIIDTYEYLIIEANDRDLLATTTILRLERFMAARENVVPVLLEKVYRLIQDKLELTHQPL
VTQLAQHLFSNISQDDLVQRNESDLYGAVISLWHHICEKKPNDISVRVFNPTVSRHGWQS
THTIVEIVVPDGPFLVDSVKMALVRLDLSSHLMLHGPTKISRDKTNAVTALNDPDGKRLS
LFHIEVDMLTDKALMTELKNELKSILVDAGLVVSGWKPMAARLNHVIEEIEQQKNSLPIE
NERINETIAFLRWLGDHNFTFMGYKEYDLVAVEGDHELRPTDEQGMGILSVGERVRSIKL
SNLADSARIEAKKPYLLIVTKGNTASHIHRPAYTDYIGIKKFGKNGKVVGEHRFTGLYTS
AVYNQSVSNIPLINEKVERILDSSGYLAGSYSYKALNNILENFPRDELLQASEHELLEVG
SGVVQMQDRDMLRLFVRRDPFGRFFSCMVYVTKERYNTELRRQTQRIIGDYFDSDQEVEF
TTFFSESPLARTHYIVHVKNNNMTVNVKEIEQNLVEVSSSWDDRLQDAIIANLGESTGLP
LSKEYLKAFPRSYKEAMMPGTAVADIERLESLNDDNKLGMLFYRPQEEPSDSKAVHLKLY
HSDEPIHLSDVLPMLENLGLRVIGESPYEVTKSNGTVYWILDFSMLHTSVNDLDLREARD
KFQQAFAAIWAGELESDGFNRLVLGAGLTGREVTILRSYARYMRQVGFPFSQSYIEDTLT
HHTDLARGLVDLFIKRFDPKYKGSKKNQTELINKITSELDNVESLDDDRIIRRYMEMIMA
TLRTNYYQKDETGQPKPWLALKLKPTEIPEIPQPVPAYEIFVYAPDIEGVHLRGGKVARG
GLRWSDRQEDFRTEILGLVKAQQVKNTVIVPVGAKGGFICKRQHNFTGRDEIFAEGQRCY
KRFIRALLDVSDNIIEGEVAPPKNVVRHDEDDPYLVVAADKGTATFSDLANSVSEDYNFW
LGDAFASGGSNGYDHKAMGITAKGGWESVKRHFREMDIDCQSTDFTCIAVGDMAGDVFGN
GMLLSKHIRLQAAFNHMHIFIDPTPNSAKTWPERERLFNLPRSSWEDYNKKLISKGGGIF
SRRSKSIDLTPEIQKMLGTRKASMAPNDLIKAILKMEVDLLWNGGIGTYVKCSSETHTDV
GDRANDGLRIDGGDLRAKVVGEGGNLGMTQLGRIEYALTGGRVNTDFVDNVGGVDCSDNE
VNIKIFLNALVANGDLTVKQRNQILNKMEDDVGEIVLHDAYCQSESISVSERQGAALVKE
QIRFIHTMEKAGYLDRALEYIPDDETLLEREKMGKALTRPEISVLVAYGKMVLKEQLVCD
EISNDEFHAKQIVNYFPDELRRNYLDHMANHPLRAEIISTCLANQMVNEMGCNFVTRMQE
ETGATVVDIANAYSAAREIFDFGDILTKIRSADNKATTDAQYDLIFNIRRTLRRLSRWLL
RNRSSKYTVQQLIDLYHDDVQETMTGLDTLLVAGEVKEHNDLADRWIEKGIDRSVANYVA
RLSSLYSALDISSVAREQGKSVTQAAKLYFTLGDRLSLHWFLKQINNQAVDNNWQALARA
TFREDLDWQQRLLTGQVMSCNCTNDSFDTENALDEWIKQNQSSLARWDNILNEFKVGSVH
EFAKFSVALRELALLNLNCAANE
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgattattgatacatacgagtatttgataatcgaagcgaatgatcgcgatttattggca
accactactattctaagattggagcgttttatggccgcacgagaaaacgttgtgccggta
ctgcttgaaaaagtttaccgactaattcaagacaaactagagcttacccatcagcccctt
gttactcaacttgctcaacacttgtttagtaatatttcacaagacgatctagtccagcga
aatgagtctgacctttatggtgctgttatcagcctttggcatcatatctgcgaaaagaaa
cctaacgatatatccgtccgagtatttaacccgaccgtaagtcgacacggttggcagtct
actcatacgattgtagaaatcgtagtaccagatgggccgttcttagtagattcggtcaaa
atggcattggtacgtttagatctttctagtcacttaatgttgcatggcccaacaaaaatc
tctcgagacaaaacgaatgccgttacagcactgaatgacccagacgggaaaagactgtct
ttgtttcacattgaagtggacatgctgacagataaagctttaatgactgagctgaaaaat
gaacttaaatccattttagtggatgctggtttggtcgtatcaggctggaagccaatggcg
gcaagactcaatcatgtgattgaagagatcgaacaacaaaaaaattctctaccaatagaa
aacgaacgaattaatgaaaccatcgcatttttgcgctggctcggtgatcacaacttcact
tttatgggttacaaagaatatgacttggtggcggtagaaggcgatcatgagttgcgtcca
acggatgaacaggggatgggcatactgtcggtcggtgaacgtgttcgtagcatcaagtta
tctaaccttgcagattcagctcgaatagaagccaagaaaccttacttattgatcgtaaca
aaaggcaatacagcttctcatattcatcgcccagcttatacagattacatcggtatcaag
aaatttggtaagaatggcaaagtggtcggcgagcatcgctttacgggtttgtacacttct
gcggtatacaatcagagtgtgtcaaatattccgttgatcaacgaaaaggtagagcggatc
cttgattcaagtggctacctagcaggatcgtattcatataaagcgcttaataatatttta
gagaacttccctcgtgatgaactactgcaagccagtgaacatgagcttctagaggtgggt
tccggcgttgtacaaatgcaagatcgagacatgttacgtttgtttgtaaggcgtgatccg
tttggtcgtttctttagctgcatggtctatgtgactaaggaaagatataacacggaactt
cgtaggcaaacgcagcgaatcattggtgattattttgactcagaccaagaagttgagttc
accacattcttctctgaaagcccacttgctcgtacgcattacattgtgcatgttaaaaat
aacaatatgacggtgaacgtgaaagaaatagaacagaatctagtagaagtctcttcatct
tgggatgaccgattacaagacgcaattattgcaaatttaggtgaaagtaccgggcttcct
ctttcaaaagagtacttaaaagcgttcccacgttcttacaaagaagcgatgatgccagga
acggccgttgctgatattgaaagattagagtctcttaacgacgataataaactgggtatg
cttttctaccgtcctcaggaagagccatcggattccaaagcagtacaccttaagttgtac
catagtgacgagccaatccatttatcagatgtgctacctatgcttgagaacctcggttta
agagtaatcggtgagtcgccttatgaggtaactaagtctaatgggacagtttactggatc
ttagatttctctatgttgcacaccagtgttaacgaccttgatttgcgtgaggcaagagat
aagtttcaacaagcattcgcggcgatttgggccggagagctagaaagcgatggctttaac
cgtttggtactgggcgccggtcttactggtcgagaagtgactattctacgtagttatgcc
cgttacatgcgtcaagtcggctttccatttagtcaaagctacattgaagacacactaacg
catcacacggaccttgccagaggtttggttgatctctttattaagcgctttgatccaaaa
tacaaaggcagtaagaagaatcaaactgagttgatcaataagatcaccagtgaattagat
aatgtagaaagtttggatgatgatcgtattattcgtcgttacatggaaatgatcatggca
acgttgcgaacgaactactatcaaaaagacgaaacagggcagccaaaaccttggttagca
ctcaaactcaagccaactgagatccctgaaattccacagccggttcctgcttacgaaatc
ttcgtatacgcaccagacattgaaggtgttcacttacgaggcggcaaggttgcacgtggt
ggccttcgttggtcagaccgtcaagaagacttccgtacggaaattcttggtcttgtgaaa
gcgcagcaagtaaaaaataccgttattgtaccggtcggtgcaaaaggtggtttcatttgt
aagcgtcagcataactttactggccgtgatgaaatctttgctgaagggcaacgttgttat
aaacgctttattcgtgcgttattggacgtgtcggataacattattgaaggtgaagttgca
cctcctaagaatgtggttcgccatgatgaagatgatccgtacttagtcgttgctgcggat
aaaggcacggctacgttctctgatttggctaactctgtgtctgaagactataacttctgg
ctcggtgatgccttcgcatccggtggatcaaacggctacgatcacaaagccatggggatc
accgcaaaaggtggttgggaatcggttaagcgacacttccgcgagatggacattgattgt
cagtctacggatttcacttgtatcgcggttggtgatatggcgggtgatgtatttggtaac
ggtatgctgctgtctaagcacatacgtctacaagccgcgtttaaccatatgcatatcttc
attgacccgacaccgaactcggcaaaaacttggccggaacgtgagcgcctgtttaatcta
ccgcgttctagctgggaagattacaataagaagttgatctctaaaggcggcggtattttc
tctcgtcgatctaaatcgatcgatctaacgcctgaaattcaaaaaatgcttggcacgcgt
aaggcttctatggcgcctaacgatctgatcaaagctattttgaaaatggaagtggatcta
ctttggaatggcgggatcggtacgtacgttaaatgctcaagtgaaacccatactgatgtt
ggtgatcgtgccaatgatggtcttcgcattgatggcggagacttaagagcgaaagtggtc
ggtgaaggcggtaacttggggatgactcagttaggtcgtattgaatatgcgttaactggc
ggccgagtgaataccgattttgttgataacgttggtggtgtagattgctcggataacgaa
gttaacattaagatcttccttaatgccctggttgcgaatggcgacttaaccgttaagcaa
agaaaccagattctcaataaaatggaagatgatgttggtgagatcgtattgcacgatgca
tattgccagtcagaatctatctctgtgagtgagcgccaaggtgcggcgttggttaaagag
caaattcgctttattcatacaatggaaaaagccggttacctagatagggcgcttgagtat
attcctgatgatgaaaccctactagaaagagagaaaatgggtaaagcgttaactcgccct
gaaatctctgttcttgttgcttatggtaaaatggttcttaaagagcagttagtgtgtgat
gaaatttcaaatgatgagtttcatgcaaaacaaattgttaattactttccagatgagtta
cgccgtaactacctagatcatatggcgaatcatccactgcgagccgaaatcatttcaacg
tgtttggctaaccaaatggttaatgaaatgggctgtaatttcgtaactcgtatgcaagaa
gagacgggagcaacggttgttgatattgcgaacgcgtattcggccgcacgagagattttc
gattttggtgatattttaactaagattcgtagtgcagataacaaagccacgacggatgct
caatatgacctgatctttaatatacgtcgaacgcttagacgtttgtctcgctggttacta
agaaatcgttcaagtaaatacaccgttcagcagcttattgatttgtaccatgacgacgtt
caagagacgatgaccgggcttgatacgttattagtggctggtgaagtaaaagagcataac
gatttagcagaccgctggattgaaaagggcattgatcgctcggttgcaaattacgtggca
agactgtctagtttgtactcagcactggatatatcctcagtagctcgtgaacagggtaaa
tcggtcactcaagcggcaaaattgtacttcacgctcggagaccgtttgtcactgcattgg
ttcttgaaacaaattaacaatcaagcggtggataataactggcaagcgttggcaagagcg
acattccgagaggatctcgattggcagcaaagattgttaaccggacaggttatgagttgt
aattgcaccaacgattcgttcgacaccgaaaatgctttggatgaatggataaagcaaaat
caatcatctctagcacgttgggataacatattgaatgaattcaaagtcggctccgtacat
gaatttgctaaattttcagtcgcattacgagaattagcacttttaaatttgaattgtgct
gcaaatgagtaa
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