KEGG   Vibrio tapetis subsp. tapetis: A1662
Entry
A1662             CDS       T05424                                 
Symbol
ycfD
Name
(GenBank) conserved hypothetical protein
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
vta  Vibrio tapetis subsp. tapetis
Brite
KEGG Orthology (KO) [BR:vta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vta03009]
    A1662 (ycfD)
Enzymes [BR:vta01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     A1662 (ycfD)
Ribosome biogenesis [BR:vta03009]
 Prokaryotic type
  ribosomal protein modification factors
   A1662 (ycfD)
SSDB
Motif
Pfam: JmjC_2 WHD_ROXA Cupin_1
Other DBs
NCBI-ProteinID: SON49641
UniProt: A0A2N8ZCL1
LinkDB
Position
A:1749351..1750493
AA seq 380 aa
MYQLSFSLEQFLSEFWQKKPTIIKAGFANFEDPMSPDELAGLTMEEEIDSRFVSNLEGEW
QAEHGPFKEEKFTELGETNWSFIVQAANHWHTEAAQLVKPFSALPNWLFDDLMISYSVAG
GGVGPHIDQYDVFIIQGQGKRHWRVGAKDEGQYVETCRHSVLRQIEGFDAIIDDVLEPGD
ILYIPPGFPHDGYALEASMSYSVGYRSPKEQELISNFADFVLAHDIGDVHLHNPEQQPQQ
NTGLIQTNDLDHLKGMLNKALEDQSFVDKFMGCLLSQSRHQLDVVAPEDEWTSEEIQNHL
EHGGVFERVSGLRAYYHQHDLNTAYINGEVIQVTKPQQPLIHALCDSQQLANESILSCED
ITSVITILTELVNKGYWFSE
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgtatcagctttccttttctttagaacaattcctctctgaattttggcagaaaaaaccc
actatcatcaaagctggtttcgccaacttcgaagaccctatgagtccagacgaactcgcc
ggcttaaccatggaagaagaaattgactctcgtttcgtttcgaacttagagggtgaatgg
caagccgaacatggtccttttaaagaagaaaaattcacagagcttggcgagactaactgg
tcttttatcgttcaagccgccaatcactggcacactgaagccgctcagcttgtaaaaccg
tttagcgcactgccaaattggctatttgatgatctgatgatcagttactctgttgctggc
ggcggcgttggtcctcatatcgaccaatacgatgtgtttatcattcaaggacaaggtaaa
aggcactggcgcgttggtgcgaaagatgaaggtcaatacgtagaaacttgccgccactct
gtacttcgtcaaattgaaggttttgacgccatcatagatgatgttttagaaccaggtgac
atcttatacattccaccaggtttccctcatgatggttatgcactagaagcatcaatgagt
tattccgtaggctaccgttcaccaaaggaacaagagcttatcagtaactttgccgatttt
gttttagctcatgatattggcgatgtgcacctgcataacccagagcaacagcctcaacaa
aacaccggtttgatccaaaccaatgatttagaccacctcaaaggcatgttgaacaaagcc
cttgaagaccaatcttttgtcgataaatttatgggttgcctgctcagtcaatctcgccac
cagcttgatgtggtcgcgccagaagatgaatggacgagtgaagaaattcaaaaccacctt
gaacacggtggcgtatttgaacgtgtatctggactaagagcctactaccaccagcacgat
ttaaacaccgcgtacattaacggtgaagtcatacaagtcactaagccacaacagccattg
attcatgcgctgtgtgatagccaacagcttgccaatgaaagcatcctgtcttgtgaagac
ataacgagtgttatcactatattgaccgagcttgtgaacaaaggctactggttcagcgaa
taa

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