Vigna umbellata (ricebean): 124822896
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Entry
124822896 CDS
T09662
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like
KO
K12126
phytochrome-interacting factor 3
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04075
Plant hormone signal transduction
vum04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124822896
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
124822896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vum03000
]
124822896
Transcription factors [BR:
vum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
124822896
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Phospholip_A2_2
Motif
Other DBs
NCBI-GeneID:
124822896
NCBI-ProteinID:
XP_047150941
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MIKRAEFSKAASSSKGSEHSSVINSCNGSVESQNPLSSDASNLVPDEQSPAVGHNSGLVV
RGSRGLHRNQKSSSVGFEGKGKAETKYSDEGLLESSSVCSLGASNNRNVCGRKHDDIDDS
VQNYEEAEDVVKEKPAREGTGVKRSRNAEVHNLCERKRRDKINKRMHILRELIPNCNKTD
KASMLDDAIEYLKTLKLQLQIMKMGGGFCMPFMMLPGHGMMNAPHLQQLMGVEMGLRSGT
TIPCNLPQFATIPLPAITDNRVHMFRFPNQVPTMPISHASFIPMVGNPRIPTGTATNMAE
NPSHQLTTLLASLSKNSYLNGQTELATKQPLNQVFPHQ
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaagagctgagttttcaaaggctgcttctagcagcaaaggttctgagcattcc
tcagtgataaattcgtgtaatggatcagtcgaaagccaaaaccctttgagttctgatgca
tcaaaccttgttcctgatgagcaatctccagctgttggtcataacagtggtcttgttgtt
cgcggatctcggggtctgcatcgtaaccaaaaatcaagctcggtaggttttgaaggaaag
ggaaaagctgaaacaaagtacagtgatgaaggcttgttagaatcttcttccgtatgctct
cttggagcctcaaacaacagaaacgtctgtggtaggaaacatgatgacatcgatgactcg
gtgcagaactatgaagaagcagaagatgtagtgaaggaaaagcctgctcgggaaggcaca
ggagtgaagagaagtaggaatgcagaagttcataatttgtgtgaaaggaaacgaagagat
aagataaacaagaggatgcatatattgagggagctcatacccaactgcaacaagactgat
aaagcttcaatgcttgatgatgccattgaatatcttaagaccctcaagcttcagttacag
attatgaaaatgggtggcggattttgcatgccttttatgatgttacctggtcatggtatg
atgaacgcaccccatttgcagcagttaatgggagttgaaatggggttaaggtcaggcaca
accatcccttgcaatctgcctcagttcgctacgatacctttgcctgcaatcactgacaac
agagttcatatgttccgtttcccaaaccaagttccgaccatgcccatttctcatgcatcg
ttcattccaatggttggaaatcctcgtattccaaccggcacagctaccaacatggctgaa
aacccttcccaccagttaactactctattggcctcactctccaagaactcatatcttaat
ggacaaactgaacttgcaacaaaacaaccattgaatcaggttttccctcaccagtag
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