Vigna umbellata (ricebean): 124826344
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Entry
124826344 CDS
T09662
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124826344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124826344
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124826344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_15
AAA_23
Arf
AAA
ORC-CDC6-like
ATP-synt_ab
AAA_30
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
124826344
NCBI-ProteinID:
XP_047155111
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MAGDGTHSDSKAATIVIKDLKFTYPGIDGHAPPGSSPLIQNFSLTLGSGDRCLLVGSNGA
GKTTILKILGGKHLVEPDMVRVLGRSAFHDTTLVSSGDLCYLGGEWRRDVAFAGFDVPIQ
MDVSAEKMIFGVAGIDPQRSAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLL
LDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLEDWPTHIVYVAHGKLQLAM
PMDKVKEISKLSLMRTVESWLRKERDEDRRKRKERKAAGLPEFGKKIEGSRVTGDPARAA
IRATNNGWAAGRLNSTVAGEENFILSSNRVLRQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgatgggacccattcagattcaaaagctgcaacaattgtcattaaagatctc
aaatttacataccccggcatcgacggccacgcgccgccgggttcctcaccgcttattcaa
aacttctctctcactctcggttccggcgaccgctgccttctcgtcggttccaacggcgcc
gggaaaaccacgatcctgaagatactaggagggaagcacttggtggaacctgacatggtt
cgcgtgcttggaagatcagcttttcacgacaccactttggtgtcttctggtgatctctgt
tatctcggtggcgagtggaggcgagatgttgcttttgcgggttttgatgtgccaatacag
atggacgtttctgctgaaaaaatgatatttggtgtggctgggattgatcctcaaagaagt
gcggagctcatcaaggtattggacattgatctttcctggagattgcataaagtatctgac
ggtcaaagaagaagagtacagatttgtatgggtcttctcaaaccgttcaaggttcttctt
cttgatgagataactgttgaccttgatgttctagcaagagctgaccttcttagatttcta
agaaaggaatgtgaagagaggggtgccaccattatctatgcaacacatatatttgacggt
cttgaggattggcctacacatattgtgtatgtagcccatggaaagctgcaactagcaatg
cctatggacaaagtcaaagaaattagcaaattgtcactaatgagaacagtagaaagttgg
ctgcggaaggaacgagatgaagatagaaggaaaagaaaagaaagaaaagcagctgggctt
cctgaatttggaaagaaaattgagggaagccgtgtaacaggggatcctgcacgtgctgca
attcgagcaactaataatgggtgggcagcaggacgattaaattccaccgttgctggtgag
gaaaacttcatcctcagctctaatcgagtactgaggcagtag
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